Oryza sativa japonica (Japanese rice) (RAPDB): Os04g0588200
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Entry
Os04g0588200 CDS
T02163
Name
(GenBank) Conserved hypothetical protein
KO
K10742
DNA replication ATP-dependent helicase/nuclease Dna2 [EC:
5.6.2.3
3.1.-.-]
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Os04g0588200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dosa03032
]
Os04g0588200
Enzymes [BR:
dosa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
Os04g0588200
DNA replication proteins [BR:
dosa03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
Os04g0588200
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
Os04g0588200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dna2
AAA_12
AAA_11
AAA_30
AAA_19
UvrD-helicase
Dna2_Rift
nSTAND3
ResIII
PhoH
Motif
Other DBs
NCBI-ProteinID:
BAF15608
RAP-DB:
Os04g0588200
UniProt:
Q7XN16
LinkDB
All DBs
Position
4
Genome browser
AA seq
1287 aa
AA seq
DB search
MAPRKRTGAAGWGACFEEACGLAAVAAGQVRHSPLLRAPVPGLLPERQAPEGRRPLAASR
CLPTCLRRHRRSSRRSHRRCRRRSPRLWRRSGSGFLLGWFGGFLFGAVQLIKQSQDDGGG
EVVTWKISPVNDRLRMVTSRQMTGMALHPCSNNEKHSSVESTKKWHSSLLGMSRCTASAR
NLDMCGTGPGGCDGVEDTQSPFRTPPSLSYRCSEQQLNGGVVSDGGPEQLGAGEHKKALL
DLLDQVEDAIMEEELPADGENKGEQLINGDPKNISCSPIADSDQNVPSQKSLDAPPFDSF
LVLEVSEKHKGDNLPCDRYPVKVLRLLNEHGGKEHAVHLCDEWFHSLISPGDTVSVIGEF
TDHGICIIDHDKNLVIVHPELLISGTRVASSFHCPRRSVLDDRLKSNEYSTSALIGTLLH
QVFQAGLLEDVPSTQFLEQQAKEVLLKNIESLYACGASESNTLKTLIEAVPKILNWYKCF
MKVSKCNNVNFGQIEGQKTVGVVEVMDIEEMAWAPRYGLKGIIDASIRSRVSCNGSSYDR
VMPLEFKTGKGTSGQTAVEHTAQVILYTLLMTERYLNKDIDLGLLYYLHTDQTLGIKVKR
SDLIGLIMRRNELATEILKASISQSFPPMIQAHGGNAATSGLGDLFDNLVNHLTVAHHTF
LKHWDRLIDLEARVSQVKKKEIFQPHHSNTGSRHSSPSYFVLDVTNGHSIDSSGKSKRYI
YTFLRQKLQPETADQPGEHVESVDFSLKCGDSVVLSTKSGRIAVANGYIRDLSRAHITVS
LPRRLRLPGSNSLLEQGDLQCEVWRIDKDESVSSFATMRLNLVQLFAENPQNSHLRKLIV
DLEAPRFDSGGLLSQDPALSYIQSLPNLNNDQQRSLHKILAAKDYALILGMPGTGKTYTM
VHAVKSLLMRGESILLTSYTNSAIDNLLMKLKAEGVDFLRIGRHEAVHPDVKGHCLSTTD
IQSVDAVKARMEQVQVVGVTCLGIYHPLLAHKKFDTCIMDEAGQITLPVSLGPLMLATKF
VLVGDHYQLPPLVQSSEARENGMGVSLFWRLSEAHPQAISALRCQYRMSSGIMELSNSLI
YGNRLSCGSLEIANAKLKLSGRGPVRLKLKEILNPDRAVVFANTDEVPAFEAKEHRTVNN
PTEALIVSWITNELLKRGVAQDGVGIITPYNAQANLIQQHVDASVEVHTIDKYQGRDKEC
IIVSFVRSNGNTRASGSSLLGDWHRINVVLTRAKKKLIMVGSAATLSTIPLLRLMIEKVA
ERGGQLDLTNKDVQSIRELTSSRLNVQ
NT seq
3864 nt
NT seq
+upstream
nt +downstream
nt
atggctccacggaagcggacgggggcggctggctggggtgcatgcttcgaagaagcctgc
ggcctcgcagccgtcgcagccggccaagttcggcattctccacttcttcgagcgccagtc
ccaggcctcctcccagaacgccaagcgccagaaggccgacggcccctcgcagcctcccgc
tgcctacctacctgcctccgccgccaccgccgctcatcgaggaggagccatcggaggtgt
cgccggaggtcaccaagactctggcgccgaagcgggtcaggttttctcctgggatggttt
ggtggtttcttgtttggtgcggtccagctgattaagcagagccaggacgatgggggtggg
gaggttgtgacttggaagatctcgccggtgaatgatcgcctgcgcatggtcacttcaagg
cagatgactggtatggcgcttcatccgtgctcaaacaatgagaagcattcctcggtcgag
tctacaaagaaatggcattcatcactgctgggcatgtcaagatgtactgcttcagcacgc
aatttggatatgtgtggaactggtccaggtggctgtgacggtgtggaggacacccaaagc
ccatttcggactcctccatcactgtcctataggtgcagtgagcagcagcttaatgggggt
gtggtttctgatggaggacctgagcagttgggggcaggggagcacaaaaaggcactactt
gatcttttagatcaagtggaagatgcaatcatggaagaagaattacctgctgatggtgag
aataaaggagagcagctcataaatggtgatccgaaaaacattagttgttctcctattgct
gacagcgatcaaaatgtaccctcccagaagtcccttgatgccccgcccttcgatagcttt
ttggtgttggaggtgtcagaaaagcacaaaggcgataacttaccatgtgatcgctatcct
gttaaggttttacgtttgctgaatgagcacggtgggaaagagcatgcagtccatttgtgt
gatgagtggttccatagccttattagcccaggcgacacagtaagtgtcattggagaattc
actgaccatggaatatgtattattgatcatgacaaaaatcttgttatagtgcatccagaa
ttactcatatctggaacacgggttgcttctagttttcattgtccaagaaggtctgttctc
gatgacagactaaaaagcaatgaatattcaacaagtgctttgattggtactctgctgcat
caagtattccaggcagggctacttgaagatgttccttcaacgcaattcttagagcagcaa
gccaaagaagttcttttgaaaaatattgagagtttatatgcatgtggagccagtgaaagc
aacacgcttaaaacgctgattgaagcagtccccaaaatattgaattggtacaagtgcttt
atgaaggtatcaaaatgtaacaatgtaaattttggtcaaattgaaggacaaaagactgtt
ggagttgtggaggtaatggatattgaggagatggcctgggctccaagatatggtttgaaa
gggattattgatgcttctattagatcaagggtttcatgcaatggtagttcatacgacaga
gtaatgcctctggagttcaaaactggtaaaggaactagtggtcagacagctgtggaacac
actgcccaagtgatattgtacacgctattgatgacggagagatacttgaacaaggatatt
gacttgggtcttctgtattatcttcacacagaccaaacattgggcatcaaagtcaagagg
tctgatttaattggattaataatgcgtcggaatgagcttgccactgagatcctgaaggca
tcgatttcacagagttttcccccgatgatacaggcgcatggaggcaatgctgcaactagt
gggcttggtgatttatttgataatctcgtgaatcacttgacagttgcacatcataccttt
cttaaacactgggacagattgatcgatcttgaagctagagtttctcaggtcaagaagaag
gaaattttccagccacatcattcaaatactgggagcaggcattcttccccatcttatttt
gtccttgatgttacaaatggacattcaatagattcatctggaaaaagcaaaagatacata
tatacttttctgcgccagaagttgcagcctgagacagctgatcagccaggagaacatgtt
gaaagtgtagattttagcctcaaatgcggtgattctgtggtgcttagcacaaaatctggg
cgaatagctgttgcaaatggatacataagggacctcagccgtgcccatataacggtttca
ttgccacgacgtctgagacttccaggaagtaattccttgttagagcaaggagatctccaa
tgtgaagtttggcgtatagataaggatgagtctgtttcttcatttgctaccatgagactc
aaccttgtccaactatttgctgagaatccacaaaactctcacctaaggaagttgattgtt
gacctcgaggctcccagatttgatagtggaggactcctaagtcaagatccggcactatca
tatatacaatcattgccaaatttgaacaatgaccaacagagatcgctgcataaaattcta
gcagcaaaagattatgcgcttatcctaggaatgcctggaacaggcaaaacatatacgatg
gtgcatgccgtgaagtcattattgatgagaggggaatctattttgctaacctcatatacc
aattcagctatagataatttgcttatgaagttgaaggctgagggtgtagattttcttcga
attggaaggcatgaagctgtacatcctgatgtcaaaggccactgcttgtcaacaacagat
atacaatcagtagatgccgtcaaagctagaatggagcaagtgcaagttgttggagtcact
tgtttgggaatttatcaccctttactagcacataagaagtttgacacatgtatcatggat
gaggcaggccagatcacattaccggtatctctgggacctttgatgcttgcaacaaagttt
gttctagtaggagatcattatcagcttcctccacttgttcagagttctgaagctcgagag
aatggtatgggtgtcagtttattttggaggttgtcagaagcacaccctcaagcaatttca
gcattgcgatgccagtaccgaatgtcatctggcattatggagctctcaaattcattgatt
tacggcaataggttatcctgtggttcgttggaaattgcaaatgccaaactcaagctttct
ggcagaggtcctgttcgcttgaagctgaaagagatcttgaaccctgatagggctgtcgtc
tttgcgaacacagatgaagtaccagcttttgaggccaaggaacatagaactgtgaacaat
cctacagaagcattaattgtttcatggatcaccaatgaattgctaaagagaggtgtagct
caagatggggttggtataataactccatataatgcccaagcaaatctcattcagcaacat
gtagacgcttcagttgaggttcatacaattgacaagtaccaggggagggataaagaatgc
attatagtatcttttgtacggtccaacgggaatacaagggctagtggttcttctttgctt
ggtgattggcacaggatcaacgttgtcttgacacgtgcaaagaagaagctcatcatggtg
ggatccgctgcaactctttcaacgatcccattgttgagacttatgattgagaaggtagct
gagcgtggcggtcagttagatctgacaaataaggatgtacagtcaattcgagagctaaca
agctctcgattgaatgtacaatag
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