KEGG   Oryza sativa japonica (Japanese rice) (RAPDB): Os04g0599800
Entry
Os04g0599800      CDS       T02163                                 
Name
(GenBank) WD40-like domain containing protein
  KO
K03363  cell division cycle 20, cofactor of APC complex
Organism
dosa  Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:dosa00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    Os04g0599800
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:dosa04121]
    Os04g0599800
   03036 Chromosome and associated proteins [BR:dosa03036]
    Os04g0599800
Ubiquitin system [BR:dosa04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   APC/C
    Target recognizing subunit
     Os04g0599800
Chromosome and associated proteins [BR:dosa03036]
 Eukaryotic type
  Sister chromatid separation proteins
   APC/C complex
    Os04g0599800
SSDB
Motif
Pfam: WD40_CDC20-Fz Beta-prop_THOC3 Beta-prop_WDR3_1st Beta-prop_WDR5 WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 WDR55 ANAPC4_WD40 Beta-prop_TEP1_2nd Beta-prop_WDR3_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_1st Beta-prop_RIG_2nd Beta-prop_WDR19_1st EIF3I Beta-prop_EML Beta-prop_Aladin Beta-prop_IFT140_1st Beta-prop_WDR36-Utp21_2nd WD40_MABP1-WDR62_2nd WD40_Gbeta Beta-prop_HPS5 Beta-prop_EIPR1 Beta-prop_WDR35_TULP_N eIF2A Beta-prop_WDR90_POC16_2nd Beta-prop_VPS8 Ge1_WD40 Beta-prop_RIG_1st WDR90_beta-prop_4th Beta-prop_WDR75_1st Beta-prop_SCAP RMC1_N Beta-prop_DCAF4 WDR54 Tricorn_2nd CFAP43_N KNTC1_N WD40_like
Other DBs
NCBI-ProteinID: BAF15668
RAP-DB: Os04g0599800
UniProt: Q0JAG9 A0A0N7KJM4
LinkDB
Position
4
AA seq 504 aa
MDAGSHSISSEKSSRYVAPRQPLQEAGSRPYMPSLSTASRNPSAKCYGDRFIPDRSAMDM
DMAHYLLTEPRKDKENAAASPAKEAYRKLLAEKILNNRTRILSFRNKPPEPESILTELRA
DAASIQAKPAKQRRYIPQSAERTLDAPELVDDYYLNLLDWGSSNVLSIALGNSVYLWDAT
NSSTSELVTVDEDNGPVTSVSWAPDGRHIAVGLNSSDVQLWDTSSNRLLRTMRGVHDSRV
GSLAWNNNILTTGGMDGKIVNNDVRIRNHVVQTYQGHQQEVCGLKWSGSGQQLASGGNDN
LLHIWDVSMASSMPSAGRTQWLHRLEDHLAAVKALAWCPFQSNLLASGGGGSDRCIKFWN
THTGACLNSIDTGSQVCSLVWNKNERELLSSHGFAQNQLTLWKYPSMVKMAELTGHTSRV
LFTAQVIFCSLYLPFKLTNIALNRLLITCLVVILQSPDGLTVASAAADETLRFWNVFGAP
EAPKTATKGSHTGMFNNSNHIHIR
NT seq 1515 nt   +upstreamnt  +downstreamnt
atggatgcaggttcgcactcgatctcatcggagaagagcagccggtacgtggcgccgcga
cagccactccaggaggccggatccagaccgtacatgccatcgctgagcacggcgtcccgc
aacccgtcagccaagtgctacggtgacaggtttattccggacaggtcggcgatggacatg
gacatggcgcactacctgctgacggagccgaggaaggacaaggagaacgcggcggcgtcc
ccggccaaggaggcgtaccggaagctgctggccgagaagatcctcaacaaccgcaccagg
attctctccttccgcaacaagccgccagagcccgagagcatcctcacggagctccgtgct
gatgcggcttccatccaagccaagccggcgaagcagcgccgatacattcctcagtctgcc
gagaggactctggatgctccagagcttgttgatgattactacctcaacctactggactgg
ggaagcagcaatgtgctatccattgcgctgggcaactcggtgtacctctgggatgccacg
aacagttcaacttctgagcttgttaccgtcgatgaggacaatggccctgtcaccagcgta
agctgggctcctgatggccggcacatcgccgttggtctcaactcctccgatgtccagctc
tgggacaccagctcaaaccgactgctgaggacgatgcgaggcgtgcacgattcgagggtc
ggttcgctggcatggaacaacaacatcctcacaactggtggaatggatggcaagattgtg
aacaatgatgtgaggatcaggaaccatgttgtgcagacataccaggggcatcagcaggag
gtgtgtggcctcaagtggtcaggatcagggcagcagcttgccagtggtggcaatgacaac
ctcctgcacatatgggatgtgtccatggcatcctctatgccgtctgctggccgcacccag
tggttacacaggcttgaggatcacttggctgctgtgaaggctctcgcgtggtgcccattc
cagagcaacctgctggcatctggtggtggtgggagtgaccggtgcatcaagttctggaac
acacataccggcgcatgcctcaactcgatcgacactgggtcacaagtgtgctcgctggtc
tggaacaagaatgagagagagctgctaagctcacatggattcgctcagaatcagctcact
ttgtggaagtacccgtcaatggttaagatggctgaactcactggccatacctctcgtgtc
cttttcacggctcaggttatcttttgctccttgtacctgccgtttaaattgacaaatatt
gctctgaacagattgctgattacttgtcttgtggtaatcttgcagagccctgatggtctc
acagtagcatctgctgcagcagatgagaccctgagattctggaacgtatttggggctcct
gaagcacccaagactgcaaccaagggttcccacactgggatgttcaacaattccaaccac
attcacatccgttga

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