Oryza sativa japonica (Japanese rice) (RAPDB): Os04g0626900
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Entry
Os04g0626900 CDS
T02163
Name
(GenBank) Conserved hypothetical protein
KO
K19025
AP-5 complex subunit zeta-1
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dosa03400
]
Os04g0626900
DNA repair and recombination proteins [BR:
dosa03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AP-5 complex
Os04g0626900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPG48
TPR_AP5Z1_C
DUF4172
Motif
Other DBs
NCBI-ProteinID:
BAF15864
RAP-DB:
Os04g0626900
UniProt:
Q0J9X3
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Position
4
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AA seq
572 aa
AA seq
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MASPELAAGDGSYNFHLRSLSAASRDSAAAADPASDPILLESVRRVCEMCKKAKGPSDEM
VARAFPVMSKLFQRCAAAPTQSVASSGVLLLTILQFFLDFGEAVLHDADGSLRTFFRSCL
SREFADPIVAERTLEFLIANKTKILSSFPTLIPQFFPLLLKLIASNGERLERKFSEVLPL
MMSAGSFLPLFLSLMDLPMLVVALEKVERSSGTLIGSSIATIQKSAAPEMLLALMDEAYT
GSAIEDAIGNAGSDDSGPLDLADPMFLDLLKDENDGIAAKHWTSPTISSTLQAAVNSPQS
DRLKQSLKMAPRFLTLYFATALRDVNDSLLCALIPVVMSRYAAMFPDKVYSFEVRKRLSD
FILAAFQRSPDIIALLKKPITDRLGEAHDNPAKTELALHLCWAIGEHGAGGKNRKDVARE
LFENLELLLYENLATSRLGLSQDTGFDPMGASSRKSSQARLLCFVVTAIAKLATFHNELL
PRARVSLAKVARSRTSDRRVWQRACDYLGLLNEPAICLSVLGPSTAQGNGPGIVNWSEGG
TKMVAHIPFYLLAEQKGAPIHDFSFDDLVPTE
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgccggagctcgccgccggcgatggcagctacaacttccacctccgctccctc
tccgccgcatccagggactccgccgcggccgccgaccccgcctccgaccccatcctcctc
gaatccgtaaggagggtgtgcgagatgtgcaagaaggccaaggggcccagcgacgagatg
gtggcccgggcgttccctgtgatgagcaagctgttccagcgctgcgccgccgcgccgacc
caatccgtggcctccagcggcgtgctgctactcaccattctgcagttcttcctggacttt
ggggaggcagtcctgcatgatgctgatggtagcttgaggaccttcttccgctcttgccta
agtagggagttcgctgatcctattgtcgcagaacgtacacttgaattcctgatagcgaat
aagacaaagatcctgagctcttttcccacattaattccacagttttttccattgttgctg
aagctaattgcatcaaatggtgagagattggagaggaagttctcagaagtgcttccgtta
atgatgtcagcaggatcttttcttcctctcttcctgtcccttatggatcttccaatgtta
gtggtagcattggaaaaggtggaaagaagttctggaactctcatcggtagtagtatagct
actatacagaagagtgctgctcctgagatgctacttgcactaatggatgaagcatacact
ggttctgctatagaagatgccattggcaatgcaggttcggatgatagtggtcctctagac
cttgctgacccgatgttccttgatcttctaaaagatgagaatgatggtattgctgcaaaa
cattggacatctcctacgatatcttcaaccttacaggcagcagttaatagcccacaatcg
gacagattgaaacagtcactgaaaatggcacctcgttttcttacattatattttgctaca
gcattgcgggacgttaacgactcactcctatgcgctctgattcctgtagttatgtcaaga
tatgcagcaatgttccctgacaaagtatactccttcgaggtgaggaaaagactttcagat
ttcatattggctgcattccagcgctcccctgacatcattgcactgctaaagaagcccatt
acagacagactaggggaggctcacgataatcctgcaaagactgaattagcattgcatttg
tgttgggccattggtgagcatggagctggaggaaaaaatcgcaaagatgtagctcgtgaa
ctgtttgaaaatttggagttgctgttatatgaaaatctggctaccagtcgtttgggatta
agtcaggacacaggatttgatcctatgggtgcatcttctagaaaatcatctcaagctagg
ctcctctgctttgtggtgactgccatagcaaagctagcaacgttccataatgagttgctt
ccaagagcacgtgtatcattggccaaggtcgctcgttcccgaacctcggacaggagagtg
tggcaacgtgcttgtgactatttaggtctattgaatgaaccggccatttgtttatctgta
ctaggaccatccaccgcacaaggaaatggtcctggtattgtcaactggagtgaaggagga
acaaagatggtagctcacattccgttctacctgttagctgaacaaaaaggtgcaccgatc
catgatttttcgtttgacgatctcgtccccacggaatga
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