Oryza sativa japonica (Japanese rice) (RAPDB): Os04g0627000
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Entry
Os04g0627000 CDS
T02163
Name
(GenBank) Similar to Roc1
KO
K09338
homeobox-leucine zipper protein
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dosa03000
]
Os04g0627000
Transcription factors [BR:
dosa03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain other
Os04g0627000
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDF2_C
START
Homeodomain
Homeobox_KN
TUSC1
MRP-L20
DciA_cyano_C
Motif
Other DBs
NCBI-ProteinID:
BAF15865
RAP-DB:
Os04g0627000
UniProt:
Q0J9X2
LinkDB
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Position
4
Genome browser
AA seq
784 aa
AA seq
DB search
MMIPARHMPSMIGRNGAAYGSSSALSLSQPNLLDNHQFQQAFQHQQQQHHLLDQIPATTA
ESGDNMIRSRASDPLGGDEFESKSGSENVDGVSVDDQDPNQRPRKKRYHRHTQHQIQEME
AFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKNQHERHENSQLRSDNEKLRA
ENMRYKEALSSASCPNCGGPAALGEMSFDEHHLRIENARLREEIDRISAIAAKYVGKPMV
PFPVLSNPMAAAASRAPLDLPVAPYGVPGDMFGGGGAGELLRGVQSEVDKPMIVELAVAA
MEELVRMAQLDEPLWSVAPPLDATAAAMETLSEEEYARMFPRGLGPKQYGLRSEASRDSA
VVIMTHANLVEILMDANQYAAVFSNIVSRAITLEVLSTGVAGNYNGALQVMSVEFQVPSP
LVPTRESYFVRYCKQNADGTWAVVDVSLDSLRPSPVLKCRRRPSGCLIQEMPNGYSKVTW
VEHVEVDDRSVHNIYKLLVNSGLAFGARRWVGTLDRQCERLASVMASNIPTSDIGVITSS
EGRKSMLKLAERMVVSFCGGVTASVAHQWTTLSGSGAEDVRVMTRKSVDDPGRPPGIVLN
AATSFWLPVPPKRVFDFLRDESSRSEWDILSNGGIVQEMAHIANGRDQGNCVSLLRVNSS
NSNQSNMLILQESCTDASGSYVIYAPVDVVAMNVVLNGGDPDYVALLPSGFAILPDGPAH
DGGDGDGGVGVGSGGSLLTVAFQILVDSVPTAKLSLGSVATVNSLIACTVERIKAAVSGE
SNPQ
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atgatgatcccggcgaggcatatgccgtcgatgatcggccggaacggcgcagcgtacgga
tcctcatcggcactgtcactcagccagccaaacttgctggataatcaccagttccagcaa
gcgttccagcatcagcagcagcagcatcatctccttgaccagatcccggcgacgacggcg
gagagcggcgacaacatgatccgcagccgtgcgtccgaccctctcggcggcgacgagttc
gagagcaagtccggcagcgagaacgtcgacggcgtctccgtcgacgaccaggaccccaac
cagcggccgcgcaagaagcgctaccaccgccacacccagcatcagatccaggagatggaa
gcattcttcaaggaatgtccacacccagatgataagcagcgcaaggagctgagccgggag
ctcggcctggagcctctccaagtgaagttctggttccagaacaagcgcacccaaatgaag
aaccagcatgagaggcacgagaactcgcagctgcggtcggataacgagaagctccgggcc
gagaacatgcggtacaaggaggccctgagcagcgcctcctgccccaattgcggcggcccc
gccgccctcggcgagatgtccttcgacgagcaccacctccgcatcgagaacgcccgcctc
cgcgaagagatcgataggatatcggcgatcgcggcgaagtacgtggggaagccaatggtg
ccgttcccggtgctgtcgaacccgatggcggcggcggcgtcgcgggcgccgctggacctc
cccgtggcgccgtacggcgtgccgggcgacatgttcggcggcggtggcgccggggagctg
ctgcgcggggtgcagtcggaggtcgacaagccgatgatcgtggagctcgccgtggcggcg
atggaggagctggtccgcatggcgcagctggacgagccgctctggagcgtcgcgccgccg
ctcgacgccacggcggcggcgatggagacgctcagcgaggaggagtacgcgcgcatgttc
ccccgagggctcggccccaagcagtacgggctcaggtcggaggcgtcccgcgacagcgcc
gtcgtcatcatgacgcacgccaacctcgtcgagatcctcatggacgcgaatcagtacgcg
gcagtgttctcgaacatcgtgtcgagggccatcacgctggaggtgctgtccaccggcgtc
gcggggaactacaacggtgcattgcaagtgatgtcagtggagtttcaggtgccatcgcca
ctggtgccaacgagagagagctacttcgtgagatactgcaagcagaacgcagacgggaca
tgggccgtcgtcgacgtctcgctggacagcctccgccctagccccgtcctcaaatgtcgc
cgccgtccgtcaggctgcctcatccaagaaatgcccaatggctactccaaggtgacgtgg
gtggagcatgtggaggtggacgacaggtcggtgcacaacatctacaagctgctggtgaac
tccgggctggcgttcggcgcgcggcggtgggtcggcacgctggaccgccagtgcgagcgc
ctcgccagcgtcatggccagcaacatccccaccagcgacatcggcgtgattacgagctcg
gaggggaggaagagcatgctgaagctggcggagaggatggtggtgagcttctgcggcggc
gtgacggcgtcggtggcgcatcagtggacgacgctgtccggcagcggcgccgaggacgtc
cgcgtcatgacgaggaagagcgtcgacgaccccgggaggccccccggcatcgtcctcaac
gccgccacctccttctggctccccgtccctcccaagcgcgtcttcgacttcctccgcgac
gaatcctctcgcagtgagtgggacatcctctccaatggcggtatcgttcaagaaatggcc
cacatcgccaatggccgggatcagggcaactgcgtctcacttcttcgcgtcaacagctcg
aactcgaaccagagcaacatgctgatcctgcaggagagctgcacggacgcgtcggggtcg
tacgtcatctacgcgccggtggacgtggttgcgatgaacgtcgtgctaaacggcggcgac
ccggactacgtcgcgctgctgccatcgggcttcgccatcctgcccgatgggccggcgcac
gacggtggcgacggcgacggcggcgtcggcgtcggctccggcgggtcgctgctgacggtg
gcgttccagatactggtggactccgtcccgacggcgaagctctcgctggggtcggtggcg
acggtgaacagcctcatcgcctgcacggtggagcgcatcaaggcggccgtctccggcgag
agcaatccgcagtag
DBGET
integrated database retrieval system
