KEGG   Oryza sativa japonica (Japanese rice) (RAPDB): Os04g0643000
Entry
Os04g0643000      CDS       T02163                                 
Name
(GenBank) Similar to Cullin-3 (CUL-3). Splice isoform 2
  KO
K03869  cullin 3
Organism
dosa  Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:dosa00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    Os04g0643000
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:dosa04121]
    Os04g0643000
   03400 DNA repair and recombination proteins [BR:dosa03400]
    Os04g0643000
Ubiquitin system [BR:dosa04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul3 complex
    Cullin
     Os04g0643000
DNA repair and recombination proteins [BR:dosa03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     Os04g0643000
SSDB
Motif
Pfam: Cullin Cullin_AB Cullin_Nedd8
Other DBs
NCBI-ProteinID: BAF15961
RAP-DB: Os04g0643000
UniProt: Q0J9M6
LinkDB
Position
4
AA seq 731 aa
MNSQKKRSPKIEPFRHRVDADPKSFDKSWKKLEDAIREIYNHNASGLSFEELYRTAYNLV
LHKHGLKLYDKLTENLKGHLKEMCRSIEDAQGSLFLEELQRRWADHNKALQMIRDILMYM
DRTFIATNKKTPVFDLGLELWRDIVVRTPKIHGRLLDTLLELIHRERMGEMINRGLMRST
TKMLMDLGSSVYHDDFEKPFLEVSASFYSGESQQFIECCDCGEYLKKAERRLAEELERVS
QYMDAKTADKITSVVDTEMLANHMQRLILMENSGLVNMLVDDKHEDLSRMYNLFKRVPDG
HSTIRSVMASHVKESGKALVSDPEKIKDPVEFVQRLLNEKDKYDEIISISFSNDKAFQNA
LNSSFENFINLNNRSPEFISLFVDDKLRKGVKGANEEDVETVLDKVMMLFRYLQEKDVFE
KYYKQHLAKRLLSGKTTSDEAERSMLVKLKTECGYQFTSKLEGMFNDLKTSHDTMQSFYA
NLSGDTDSPTISVQILTTGSWPTQPCTPCKLPPEIVDISEKFRAFYLGTHNGRRLTWQTN
MGNADIKATFGGRRHELNVSTYQMCVLMLFNSADGLTYGDIEQATGIPHADLKRCLQSLA
CVKGKNVLRKEPMSKDISEDDTFYYNDKFTSKLVKVKIGTVVAQKETEPEKLETRQRVEE
DRKPQIEAAIVRIMKSRRVLDHNSIITEVTKQLQSRFLPNPVVIKKRIESLIEREFLERD
KVDRKMYRYLA
NT seq 2196 nt   +upstreamnt  +downstreamnt
atgaactcgcagaagaagcgcagccccaagatcgagcccttccggcaccgcgtggatgcg
gacccaaagtccttcgacaaatcgtggaagaagctcgaggacgccatccgcgagatttac
aaccacaacgccagcggcctctccttcgaggagctgtacaggactgcttataacttggtt
cttcacaagcatggtctgaagctatatgataaactcacagagaatttaaaaggacacctg
aaagaaatgtgcagatcaatagaggatgcccaaggtagtttgtttctggaggaactgcag
agaagatgggctgatcacaataaggcactacaaatgatcagagatatactcatgtatatg
gataggacatttattgcaactaacaaaaagacacctgtctttgaccttggtctagagttg
tggagagatatcgttgtccgcactcccaaaattcatgggaggttgcttgacacactcctt
gaactcattcatagagagaggatgggtgagatgataaacagaggtctgatgaggagtacc
accaaaatgttgatggatctagggtcttctgtctatcatgatgactttgagaagccattc
cttgaggtatccgcaagtttctatagtggtgagtcacaacagttcattgagtgctgtgat
tgtggcgaatatctcaagaaagctgagagacggcttgctgaagagttggagcgtgtttct
cagtatatggatgccaaaaccgcagacaaaataactagtgttgtggacactgagatgctt
gcaaatcacatgcagcggttgattcttatggagaattctggtcttgtgaatatgcttgtt
gatgacaaacatgaagaccttagcaggatgtacaacttgtttaaacgtgttcctgatggg
cattcaacaattagatctgtgatggcctctcatgttaaggaaagtggaaaggcattggta
tctgacccagagaagataaaggaccctgttgagtttgtccagcgtcttctaaatgagaaa
gacaagtatgatgagatcataagtatttcattcagcaatgacaaggctttccaaaatgct
ctgaattcctccttcgagaatttcatcaacttgaacaaccgatctcctgaattcatttcg
ctgtttgttgatgacaagctccggaaaggggtgaaaggggccaatgaagaggatgttgaa
actgtcttggacaaggtgatgatgctcttcagatatttgcaggagaaagatgtttttgag
aaatattacaagcaacacttggccaaacgtcttctatctgggaaaactacttctgatgaa
gctgagaggagtatgcttgtgaagctgaagacggaatgtggctaccagtttacgtcaaaa
ttggaaggcatgttcaatgatctgaagacatcgcatgatactatgcaaagtttttatgct
aatctctctggtgatactgatagcccaacaatatcagtccagatactcaccactgggtct
tggccaacacagccatgtaccccctgcaaacttccacctgaaattgttgatatatctgag
aaattccgggcattctaccttggcacccacaatggcaggagattgacatggcaaacaaac
atggggaatgcagatatcaaagcaacgttcggaggccgcaggcatgagttgaatgtctcg
acatatcagatgtgtgtcctgatgctgtttaattcagcagatggcttgacttacggtgac
attgagcaggccacaggtataccacatgctgatctgaaacgctgcctccagtctcttgct
tgtgttaagggtaagaatgtgctgcggaaggaacccatgagcaaggatatatctgaagat
gacactttctactacaatgacaagttcacaagcaagttggtcaaggtgaagattggcacc
gtggttgctcagaaagaaacagaaccagagaagttggaaactcgccagagagttgaggaa
gacaggaaacctcaaattgaggctgcaattgtcagaatcatgaagtccagaagagtcttg
gaccacaatagcataatcacggaggtgacaaagcagcttcaatcgcgctttttgccaaat
cctgttgtgataaagaaaagaatagagtccctgatcgagagggagttcttggagagggac
aaggtagataggaagatgtaccgttatcttgcatag

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