Oryza sativa japonica (Japanese rice) (RAPDB): Os04g0650800
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Entry
Os04g0650800 CDS
T02163
Name
(GenBank) Similar to Phosphoglycerate dehydrogenase
KO
K00058
D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:
1.1.1.95
1.1.1.399
]
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa00260
Glycine, serine and threonine metabolism
dosa00270
Cysteine and methionine metabolism
dosa01100
Metabolic pathways
dosa01110
Biosynthesis of secondary metabolites
dosa01200
Carbon metabolism
dosa01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
Os04g0650800
00270 Cysteine and methionine metabolism
Os04g0650800
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dosa04147
]
Os04g0650800
Enzymes [BR:
dosa01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.95 phosphoglycerate dehydrogenase
Os04g0650800
1.1.1.399 2-oxoglutarate reductase
Os04g0650800
Exosome [BR:
dosa04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
Os04g0650800
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
2-Hacid_dh_C
2-Hacid_dh
PGDH_inter
ACT
KARI_N
AdoHcyase_NAD
NAD_binding_2
F420_oxidored
UDPG_MGDP_dh_C
ELFV_dehydrog
XdhC_C
ACT_AHAS_ss
Motif
Other DBs
NCBI-ProteinID:
BAF16008
RAP-DB:
Os04g0650800
UniProt:
A0A0P0WFN9
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Position
4
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AA seq
613 aa
AA seq
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MAAPSQTTATTTHHRVLLPSHHHHRAVPPSLLRLPLRAARRGRLSAAAAAAAPAASTAAP
SEPAAGAVPGKPTVLVAEKLGAAGLELLRGFANVDCSYGLSPEELRAKIPLCDALIVRSG
TKVGRDVFEASGGRLRVVGRAGVGIDNVDLAAATEHGCLVVNAPTANTVAAAEHGIALLT
AMSRNIAQADASLKAGKWQRNKYVGVSLVGKTIAILGFGKVGSEVARRAKGLGMHVIAHD
PYASADRAHAIGVELVSMEDALTTADFISLHMPLTPATNKMLNDETFAKMKKGVRIINVA
RGGVIDEDALVRALDSGIVAQAALDVFTKEPPAPDSKLVLHENVTVTPHLGASTVEAQEG
VAIEIAEAVIGALKGELAASAVNAPMVPAEVLSELAPYVVLAEKLGRLAVQLVAGGGGIK
SVKVTYASARAPDDLDTRLLRAMITKGLIEPISSVFVNLVNADFTAKQRGVRITEERILL
DGSPETPIDYIQVHIAHVESKFPSAISESGEITVEGKVKDGIPHLTKVGSFQVDVSLEGS
LILCRQVDQPGMIGAVGSVLGEENVNVSFMSVGRIAPRKHAVMAIGVDEEPKKSTLTKIG
EIPAIEEFVFLKL
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgccgtcccagaccaccgccaccaccacccaccaccgcgtcctcctcccgtcc
caccaccaccaccgagcggtgcctccctcgctcctccgcctcccgctccgcgccgcgcgc
cggggccgcctctccgccgccgccgcggccgcggcgcccgccgcgtcgaccgcggcgccg
tcggagcccgccgcgggtgccgtaccggggaagccgacggtgctcgtggccgagaagctc
ggcgccgcggggctcgagctgctccgggggttcgccaacgtggactgctcctacggcctc
tcccccgaggagctccgcgccaagatcccgctctgcgacgcgctcatcgtgcggtcgggg
accaaggtggggcgcgacgtgttcgaggcatccgggggaaggctccgcgtcgtggggcgc
gccggggtcgggatcgacaacgtcgatctcgccgccgccaccgagcacgggtgcctcgtc
gtcaacgcacccacggcgaacaccgtcgccgcggccgagcacggcatcgcgctgctcacc
gctatgtccaggaacatcgcccaggccgacgcgtcgctcaaggctggtaaatggcagcgc
aacaagtatgtgggtgtatctctcgttggtaaaactattgcaattcttggatttggaaag
gttgggtcagaagtcgctcgtcgtgctaaaggtttgggaatgcatgtgattgcacacgat
ccgtatgcttctgctgatcgtgcccatgcaattggagttgagctagtgagcatggaagac
gctttgacaactgctgactttatctcgttgcatatgcctcttacccctgcaacaaacaag
atgctcaatgatgaaactttcgctaagatgaagaagggtgttagaattataaatgttgcg
cgtggtggtgtaattgatgaagatgctctagtcagggctcttgattcaggaatagttgca
caggctgctcttgatgtgttcactaaagagccaccggcaccagacagcaaattagtgctg
catgagaatgttactgtaacaccacaccttggtgccagcacagttgaagcacaggaagga
gtggctattgaaatagctgaagctgttattggagctctgaaaggggaacttgcagcttca
gcagtcaacgcaccaatggttcctgctgaggtgctgtcagagcttgcaccttatgttgtg
ctcgcagagaagcttgggcgcctggctgtgcagctagtggctggtggcggtggtatcaag
tccgtgaaagtgacctatgcttctgcaagggctcctgatgatcttgacacgagacttctt
cgtgcaatgatcaccaaggggttgatcgaaccaatctccagtgttttcgtcaatctggtc
aatgctgacttcactgcgaaacagaggggagttcgtatcactgaggagagaatcttgttg
gatggctcacccgagacacctattgactacatccaagttcatattgcccatgttgagtcc
aaatttcccagtgcaatatcggagagtggagagatcactgttgaggggaaggtgaaggat
ggcatcccccatctgacaaaggttggatcattccaggttgatgtgagcttggaaggaagc
ctgatcctttgcaggcaggtcgatcaacctggtatgatcggcgcagtaggaagtgtcctt
ggtgaggagaatgttaatgtcagtttcatgagtgttggaagaatcgctcctcgcaagcat
gccgtcatggcgattggtgttgatgaggaacctaaaaagagcacactgacaaagattggg
gagattccggcgattgaagaattcgttttcctcaagctctag
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