Oryza sativa japonica (Japanese rice) (RAPDB): Os04g0657100
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Entry
Os04g0657100 CDS
T02163
Name
(GenBank) Similar to Farnesyl diphosphate synthase (Fragment)
KO
K00787
farnesyl diphosphate synthase [EC:
2.5.1.1
2.5.1.10
]
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa00900
Terpenoid backbone biosynthesis
dosa01100
Metabolic pathways
dosa01110
Biosynthesis of secondary metabolites
Module
dosa_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
Os04g0657100
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
dosa01006
]
Os04g0657100
Enzymes [BR:
dosa01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
Os04g0657100
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
Os04g0657100
Prenyltransferases [BR:
dosa01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
Os04g0657100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
BAF16035
RAP-DB:
Os04g0657100
UniProt:
A0A8J8YIN5
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Position
4
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AA seq
392 aa
AA seq
DB search
MSMQEMLRIGDDDGRSDALERELKEKLRLRGDASPAKCTRQEQRWRSDHGIVDARERFVQ
AYGRLRDDLVGDDSCELTDEARRWLAQMIDYNVPGGKLNRGLSVIDSYLLLKQGSEVTED
DFFLACVLGWCVEWFQACALLLDDIMDDSHTRRDQICWYRRPEVGLRGINDGIILKCHIL
IMIKKYFREKPYFLDILEIWSEIALQTSLGQMLDLISTHTGADDLAKYSIEGYRRIVKYK
TAYYSFYLPVANALLLSGAKLEDFSGLKDILIEMGIYFQIQDDYLDCFADPNTIGKIGTD
IEDHKCSWLIVQALGHADNNQIEVLHRNYGKKDSSSVSEVKRTYAALDLKDIFSEFERRC
YNHLVTSIEAQKDHAAREILISFLKKIHQRKK
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgtccatgcaggagatgctccgcattggagacgacgacggccggagcgatgctctggaa
cgcgagctcaaggagaagctgaggttgcgcggcgatgcctcaccggcgaaatgcaccagg
caggagcagcggtggcggtctgatcatggcatcgtcgacgcccgcgagaggttcgtgcag
gcgtacggccgcctcagggacgatctcgtcggcgacgactcgtgcgagctcaccgacgaa
gccaggcgctggcttgctcagatgatcgactacaatgtacctggaggaaagttgaaccga
gggctgtcagtgatagacagttacctgctgttgaaacaaggaagtgaggttactgaagat
gacttcttccttgcttgtgtgcttggttggtgtgtagaatggtttcaagcatgtgcacta
ctacttgatgacatcatggacgattcacataccaggagagatcagatttgctggtaccgg
cgacctgaggttggcctcaggggtataaacgatggtatcatactaaaatgtcacatcttg
ataatgataaaaaagtatttcagagaaaagccttactttcttgatatcttagaaatatgg
agcgagatagctctgcagacttctctggggcagatgcttgatcttattagcacacatact
ggagcagatgatcttgcaaaatacagtattgaaggctaccgtcgcattgttaagtacaag
acagcgtactactccttttaccttcctgtggccaatgctttgctcttatctggcgcaaaa
cttgaagacttcagtggtctaaaggatatacttattgaaatgggcatatattttcagata
caggatgactacttggactgttttgctgaccctaacaccataggcaagattggaactgac
atcgaagatcataagtgttcctggttaatagtacaggctcttggtcatgctgacaacaat
caaatagaagtactacataggaactatggcaagaaggattcaagttctgtttccgaagta
aagaggacttacgcggcgcttgatttgaaagatatcttctccgagttcgaacgtcgatgc
tacaaccacctggtcacctctatcgaagctcagaaggatcatgcagcacgggagatcctg
atatcatttctgaagaaaattcatcaaaggaagaagtag
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