Oryza sativa japonica (Japanese rice) (RAPDB): Os04g0673400
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Entry
Os04g0673400 CDS
T02163
Name
(GenBank) Similar to Uracil-DNA glycosylase (EC 3.2.2.-) (UDG)
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Os04g0673400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dosa03400
]
Os04g0673400
Enzymes [BR:
dosa01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
Os04g0673400
DNA repair and recombination proteins [BR:
dosa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Os04g0673400
Prokaryotic type
Os04g0673400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
BAF16146
RAP-DB:
Os04g0673400
UniProt:
A0A5S6RAY1
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Position
4
Genome browser
AA seq
386 aa
AA seq
DB search
MAPPLPPTAPKTIADYLIRPSKRLRPTSPAPAAAASAPLSSSSLSPEQRRRADTNLALAR
ARRHLRLAESKASGGTAKLEELLVEETWLEALPGELHKPYALELCRFVAHERLHSPVPVY
PPPHLVFHALHATPFDRVKAVIIGQDPYHGPGQAMGLSFSVPEGIKIPSSLANIFKELQK
DLGCTVPSHGNLERWAVQGVLMLNTVLTVREHQANSHAKKGWEQFTDAVIKTISLKKSGI
VFILWGNSAQAKTRLIDETKHHILKSAHPSGLSASRGFFGCSTCISGLPYMRRHNIYLML
DNPPMAGTFLKRIRSWRGWDYLPLIGNSRPFEDIMWSVCLTTTSALKWAPLQWKHRKSPI
LEKIGTHLDGSLAAKQPVSCTVRRSF
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atggcgccgcctctccctcccaccgcccccaaaaccatcgccgactacctcatccgcccc
tccaagcgcctccgccccacctctcccgctcccgccgccgctgcgtcggcccccctctcc
tcctccagcctctcgccggagcagcgccgccgcgccgacaccaacctcgcgctcgcccgg
gcgcgccgccacctccgcctcgccgagtccaaagcgtcgggcggcaccgcgaagctggag
gagctgctcgtcgaggagacgtggctggaggcgcttcccggggagctgcacaaaccctac
gcgctcgagctctgccgcttcgtcgcccacgagaggttgcatagcccggtgcccgtctac
ccgccgccgcatctagtcttccacgcgcttcacgccaccccgttcgaccgtgttaaggcc
gtcatcatcgggcaggatccataccatggacctggtcaggcgatggggttgtctttctca
gtaccagaggggatcaaaattccttctagcttagcaaacatatttaaagagctgcaaaaa
gatctaggttgcaccgtgccttcacatggaaacttggaaagatgggctgtgcagggtgtt
cttatgctcaacactgtattaactgtgagagaacatcaagccaattcacatgccaagaaa
ggatgggagcaatttactgatgctgtcattaagacaatatcactgaagaaatctggaata
gtctttattctctggggaaactcagctcaagcaaagacaagattgattgatgaaacaaaa
caccacattttgaaatccgctcatccatcagggctgtctgcaagcagaggtttctttgga
tgcagcacttgcatatcaggattgccctatatgcggcgccataatatctatttgatgcta
gacaacccaccaatggctggcacttttctaaaacgaatcagatcttggagaggctgggac
tatctgccattgattggcaactctagaccatttgaagacatcatgtggtctgtctgcctg
acaaccacctcagctttgaagtgggctccattgcaatggaagcatcgcaagtcgccgatc
ttggaaaagatcggcacgcacttggatggaagtctagcagcaaagcagccggtctcttgc
actgttcgcaggtcgttctga
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