Oryza sativa japonica (Japanese rice) (RAPDB): Os04t0536300-01
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Entry
Os04t0536300-01 CDS
T02163
Symbol
Os04g0536300, YABBY_3, YAB3
Name
(RAP-DB) Similar to Yabby15 protein (Fragment).
KO
K25796
plant-specific transcription factor YABBY family protein
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dosa03000
]
Os04t0536300-01 (Os04g0536300)
Transcription factors [BR:
dosa03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Yabby
Os04t0536300-01 (Os04g0536300)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
YABBY
HMG_box_2
HMG_box
Ccdc124
Mu-like_Com
Cytochrom_B562
zinc_ribbon_12
Motif
Other DBs
RAP-DB:
Os04t0536300-01
Oryzabase:
7497
LinkDB
All DBs
Position
chr04:complement(join(26799980..26800111,26799684..26799857,26799413..26799602,26798661..26798709,26798471..26798546,26798273..26798347,26798052..26798156))
AA seq
266 aa
AA seq
DB search
MMSSAPETFSLDHLSQHQQQQPPPLAEQEQLCYVHCNFCDTILAVGVPCSSLFKTVTVRC
GHCANLLSVNLRGLLLPAAASTANQLPFGQALLSPTSPHGLLDEVPSFQAPASLMTEQAS
PNVSSITSSNSSCANNAPATSMASAANKATQREPQQPKNAPSANRTSEKRQRVPSAYNRF
IKDEIQRIKASNPDITHREAFSAAAKNWAHFPHIHFGLMPDQGLKKTGIQSQDGAGECML
FKDGLYAAAAAAAAATAASSMGVTPF
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcgtcggcgccggagacgttctcgctggaccacctctcgcagcatcagcagcag
cagccgccgccgctcgccgagcaggagcagctctgctacgtgcactgcaacttctgcgac
accatcctcgcggtgggcgtgccgtgtagcagcctgttcaagacggtcaccgtgcggtgc
ggccactgcgccaacctgctctccgtcaacctccgcggcctcctgctcccggccgccgcc
tccaccgccaaccagctccccttcggccaggctctcctctcccccacctcaccgcacggc
ctccttgatgaggtgccgtcattccaagcgccggcgagcctaatgaccgaacaggcgagt
cccaacgtgagcagcatcacgagcagcaacagcagctgtgctaacaacgcgccggcgacg
tcgatggcgtcggcggccaacaaggctacccagcgagagccgcagcagccgaagaacgcg
ccgtcagccaacaggacttcagagaagcggcagagggttccctcggcatacaaccgattc
atcaaagatgagatacaacgcatcaaggcaagcaatccggacatcacccacagggaggct
ttcagcgctgctgccaagaactgggcccatttcccacacatccattttggcctgatgccg
gaccagggcctgaagaagaccggcatacaaagccaggacggagctggggaatgcatgctc
ttcaaggacggtctctacgctgcagccgccgccgctgcagcagccacagcagcatctagc
atgggtgtcactccattctaa
DBGET
integrated database retrieval system
