Oryza sativa japonica (Japanese rice) (RAPDB): Os04t0578700-01
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Entry
Os04t0578700-01 CDS
T02163
Symbol
Os04g0578700
Name
(RAP-DB) Similar to H0404F02.16 protein.
KO
K22047
mechanosensitive ion channel protein 1/2/3
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dosa02000
]
Os04t0578700-01 (Os04g0578700)
Transporters [BR:
dosa02000
]
Other transporters
Pores ion channels [TC:
1
]
Os04t0578700-01 (Os04g0578700)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MS_channel_2nd
Motif
Other DBs
RAP-DB:
Os04t0578700-01
LinkDB
All DBs
Position
chr04:join(29188242..29189014,29189172..29189431,29189880..29189980,29190742..29190849,29191890..29192117,29192549..29192653)
AA seq
524 aa
AA seq
DB search
MSMIAATLRRSSRVTGSQNIMEICLGPCVSSGASSRWFSSCTKHSNTSILNQIKAVDRYS
PVNGMSMISRVPLSAHMDTNWLSTSNPRFNALPGFLGASSICRAYSSDTGIKAEVPQNTV
SNVPSTETVALGTSDGGSSWIDIFDNARKCTLDATTDAGKKVKELTDAITPHVQQFFDAN
PNLEKVVVPLGGTIFGTMMAWFVMPIVLRRIHKYSIQSPISALLGSSTKNDVSYETSLWS
ALEDPAKYLITFMAFSEMAGFTAPSISAYLPQAWRGAIVLSFVWFLHRWKTNFITKVAAS
SIDQTRLSAFDKISSLGLIALGVMALAEACGVAAQSILTVGGVGGVATAFAARDVLGNML
SGFSLQFSSPFKAGEYIKAGSIEGKVIEIGLTSTELMNPEQLPVTVPNSLFSSQVIVNRS
RAKWRSNVTKIPIRIEDIEKVPAISEEIKVMLRSNPKVVLDSEAPAPYCYLSRLESSYGE
LTIGCNLTKMTKDEWLSTTQGILLEAAKIIKLHGVELGSTTQCC
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atgtctatgatagcagcaactcttcgtcgatcgtctagagtaactggtagtcagaatatc
atggagatatgtcttggaccttgtgtatcttctggtgcttcttcaaggtggttcagcagc
tgtactaagcactcaaacacttccatacttaaccagatcaaggcagttgatcggtattct
ccagttaatggtatgtcaatgatcagtagggtgcctctttcagctcatatggacacaaac
tggttgtctacttcaaatcccagatttaatgcactgccaggattcttaggtgcttcaagc
atctgccgagcatactcctcagacactgggattaaggcagaagttccacagaatactgtc
tcaaatgtaccttccacagaaaccgttgcgcttggaacatctgatggtggtagttcttgg
attgatatcttcgacaatgctcgcaagtgtactctagatgctaccactgatgcaggcaag
aaagttaaggagctgactgatgcaattacacctcatgtacaacagttctttgatgcaaat
ccaaacctagaaaaggttgtggttccacttggcgggacaatctttggtacaatgatggct
tggtttgtcatgcctatcgttttaaggaggattcacaagtattcgatacagagtcctata
tcagcacttttggggagctcaacaaagaatgatgtctcgtatgaaactagcctctggagt
gcattggaggatcctgcgaaataccttatcacatttatggcattttcagaaatggctgga
ttcaccgcaccaagcatatcagcttatcttccacaggcatggaggggtgcaattgttctc
tcttttgtctggttccttcataggtggaaaacaaacttcatcactaaagttgctgcctca
agtattgatcaaaccaggttgtcagcatttgataagatctcgtcattaggactgattgca
cttggagtaatggctcttgcagaggcttgtggtgtagctgctcagtcaatactaactgtt
ggtggtgtgggaggtgttgctactgcctttgctgctcgggatgtccttggtaacatgctc
agtgggttctccttacagttttctagtccattcaaagctggagaatacataaaggctggg
tcaatagaaggcaaggtgattgaaataggactgacttctacggaattgatgaatccagaa
caacttcctgtcactgtacccaactctctgttctccagccaggtgatagtgaacagatca
cgagctaaatggcgatccaatgtgacaaagattcctattagaattgaggatattgaaaag
gttcctgccatatcagaggagataaaagttatgttaaggtccaacccaaaggttgtctta
gactcagaagcaccagctccttattgttatctttcaagattggaaagttcatatggagag
ctcaccattggatgcaacctcacgaaaatgacaaaggatgagtggctgtctacaacacaa
ggcattcttctggaggctgctaagattatcaagttacatggcgttgaactgggaagcacc
acgcagtgctgctga
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integrated database retrieval system
