Oryza sativa japonica (Japanese rice) (RAPDB): Os05g0107700
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Entry
Os05g0107700 CDS
T02163
Name
(GenBank) Transcription factor IIA small subunit (Transcription factor IIA gamma subunit)
KO
K03123
transcription initiation factor TFIIA small subunit
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Os05g0107700
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dosa03021
]
Os05g0107700
Transcription machinery [BR:
dosa03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIA
Os05g0107700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIA_gamma_N
TFIIA_gamma_C
Motif
Other DBs
NCBI-ProteinID:
BAF16340
RAP-DB:
Os05g0107700
UniProt:
Q0DLD3
B7EAK7
LinkDB
All DBs
Position
5
Genome browser
AA seq
106 aa
AA seq
DB search
MATFELYRRSTIGMCLTETLDEMVSSGTLSPELAIQVLVQFDKSMTEALENQVKSKVSIK
GHLHTYRFCDNVWTFILTEASFKNEETTEQVGKVKIVACDSKLLSQ
NT seq
321 nt
NT seq
+upstream
nt +downstream
nt
atggccaccttcgagctctaccggaggtccaccattggcatgtgcctcactgagacgctc
gacgagatggtctccagcggcaccctcagcccggagctcgccattcaagttcttgtccag
tttgataagtctatgacggaagccttggagaaccaagtcaagagcaaggtttctatcaag
ggccacctgcacacttacaggttctgtgacaatgtatggacattcatcttgactgaagca
tcattcaagaacgaggagactacagaacaagttggcaaggtgaagattgtggcctgtgat
tccaaactactcagccaataa
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