Oryza sativa japonica (Japanese rice) (RAPDB): Os05g0120100
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Entry
Os05g0120100 CDS
T02163
Name
(GenBank) Similar to Splicing factor RSZ33
KO
K12896
serine/arginine-rich splicing factor 7
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
Os05g0120100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dosa03041
]
Os05g0120100
Spliceosome [BR:
dosa03041
]
Common components
Common spliceosomal components
SR proteins
Os05g0120100
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
zf-CCHC
SLU7_N
zf-CCHC_5
Nup35_RRM_2
RRM_5
SET_assoc
CLIP1_ZNF
zf-CCHC_2
Motif
Other DBs
NCBI-ProteinID:
BAF16403
RAP-DB:
Os05g0120100
UniProt:
B9FGJ1
LinkDB
All DBs
Position
5
Genome browser
AA seq
323 aa
AA seq
DB search
MPRYDDRYGSTRLYVGRLSSRTRSRDLEYHFSRYGRIREVELKRDYAFIEFSDPRDAEEA
RYNLDGRDVDGSRILVEFAKGVPRGPGGSREYMGRGPPPGTGRCFNCGIDGHWARDCKAG
DWKNKCYRCGERGHIERNCQNSPRNLRRERSYSCSPSPRRGRGRSRSYSRSRSRSRSYSR
SRSRSLSGSPRARRELERSRSLSYSRSPRRSISPAANEKKRSPTPDGSRSPRSPQDQVSP
PPKDNAERNGSDHGDSPRGRENSRSPSDGYRSPAAANGRSPSPRNNGSPSPMDNGSRSPR
DGNGDGGSRGGSRSPRPSESPEA
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgctatgatgatcgttatggaagcacgcgcttgtatgttggtagactgtcttcc
cgcactcgttctcgtgacctagaataccatttcagcagatatggaagaatacgtgaagtg
gagttgaagcgcgactacgcatttattgagttcagtgatccccgtgatgctgaggaagca
aggtacaaccttgatggcagggatgttgatggaagccgcattcttgttgagtttgctaaa
ggggttccacgtggtcctggtggttcacgtgaatatatggggagaggacctcctcctgga
acaggtcggtgttttaactgtgggattgatggtcactgggcaagagactgcaaggctggt
gactggaagaacaaatgttaccgctgtggggagagaggtcacatagaaagaaactgtcaa
aacagcccaagaaatctcaggcgtgagagaagttattcatgctctccatcgccacgccgt
ggacgtggtcgcagtcggagctatagccggagccggagccggagccgcagttacagccgg
tctaggtccagatccctgtctggatctcccagggcacgcagagagcttgaaagatcaagg
agtcttagttacagcaggagtcccaggcgatccatctccccagcagcaaatgaaaagaag
cgcagccccacccctgatggtagccgtagtccaaggagtccacaggaccaggtgagccca
ccacccaaggataatgctgagcgtaatggctcagatcacggtgacagcccccggggcagg
gagaacagcaggagcccgtctgatggctaccgtagccctgcagctgccaacgggcgcagc
ccaagcccaaggaacaatggaagccctagcccaatggacaacggtagccgaagtcctagg
gatggaaatggtgacggtggtagccgtggtggctcacgctcacctagaccgagcgagtct
cctgaagcctga
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