Oryza sativa japonica (Japanese rice) (RAPDB): Os05g0149900
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Entry
Os05g0149900 CDS
T02163
Name
(GenBank) Tetratricopeptide-like helical domain containing protein
KO
K03354
anaphase-promoting complex subunit 7
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
Os05g0149900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dosa04121
]
Os05g0149900
03036 Chromosome and associated proteins [BR:
dosa03036
]
Os05g0149900
Ubiquitin system [BR:
dosa04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Other subunits
Os05g0149900
Chromosome and associated proteins [BR:
dosa03036
]
Eukaryotic type
Sister chromatid separation proteins
APC/C complex
Os05g0149900
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_14
TPR_1
TPR_2
TPR_19
TPR_8
TPR_12
TPR_16
CFAP70_TPR_C
TPR_CcmH_CycH
RMD1-3
TPR_11
PknG_TPR
TPR_20
TPR_7
TOM20_plant
Iml2-TPR_39
Motif
Other DBs
NCBI-ProteinID:
BAF16575
RAP-DB:
Os05g0149900
LinkDB
All DBs
Position
5:2830935..2838260
Genome browser
AA seq
431 aa
AA seq
DB search
MEGIPSKARTLKMNLMLGKLYRISRNNRAAAVCYKECLRQCPYVFEAITALAEMGLSSKE
FSLIFSQAPNRGGKAPGDSLDAQRWWNRYVEAQCCIASHDYKGGLDIYLDLMQRFPNNVH
ILLEIAKVEAIIGRNDEAIMNFEKARLIDPNIMTYMDEYAILLKSKSDYTKLNKLVHDML
HIDPARPETCLALAALWERKDERKALTYAEKSLRVDDRHITGYIMKGNLHLLLNRPDLAV
TDFRGAQELRADLRSYQGLVRAYLALSKCKDALFTAREAMKVMHQSAKALKLVGDVHAIS
SSGREKARKFYESAIRLEPGFLGAALALADLHVAEGRNKDAVLLLERYLRQWTDDSLHIK
LAQVFAATNMLSDALSHYQSALRINPHNEAAKKGLERLEKQMKGVDPDAPEEDEENEADD
VDGDQDDAELL
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atggaagggattccttctaaagcgaggactctaaaaatgaatctgatgttagggaagcta
tatcggatatccagaaataatcgtgcagctgctgtatgttataaagagtgcctgaggcaa
tgcccttatgtttttgaggctattacagctttggctgaaatggggctttcttcaaaggag
ttctctttgatattctcacaagcaccaaatcgaggaggcaaggctccaggtgactcttta
gatgcacagcgttggtggaaccgctatgttgaggcccaatgttgcattgcttcacatgat
tataaaggtggccttgacatatatctagacttaatgcagcgattcccgaacaatgtgcac
atcttgctggaaattgctaaggttgaagccatcataggtaggaatgatgaagctatcatg
aactttgaaaaggctcggttaattgatccaaacatcatgacatatatggatgagtatgca
attctccttaagtcaaaatctgactacacaaagcttaacaagttggtacatgatatgctg
catattgaccctgcaagaccagaaacatgtcttgctcttgcagcattgtgggaaagaaaa
gatgaaagaaaagctttgacatatgctgaaaagagtctccgagttgatgatagacatata
actggatatatcatgaagggaaatcttcatcttttgttgaatcgacctgatttggcagtc
acagacttcaggggagctcaagaacttagggccgatcttcgctcttatcaaggattggta
cgtgcttatctagcgctctctaaatgcaaagatgcattattcactgcacgtgaagcaatg
aaggttatgcatcagtctgcaaaagctctcaaattagttggtgatgtgcatgctatcagt
tccagtgggagagagaaggctaggaagttctatgaatccgccattcgtcttgaacctgga
tttctgggagctgcattggctttggctgatctgcatgtcgctgaaggacgaaataaggat
gcagtattgctgcttgaaagatatctaagacagtggacagatgattctctacacatcaag
ttggctcaagtttttgcagcaacgaatatgctttctgatgcactttcccactaccaatct
gctctaaggataaacccacataatgaggccgcaaagaaaggattggaacgcttagagaag
caaatgaagggagtagacccggacgcgcctgaagaggacgaagagaacgaagctgacgat
gtcgacggtgatcaagacgacgctgaactactgtag
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