Oryza sativa japonica (Japanese rice) (RAPDB): Os05g0150300
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Entry
Os05g0150300 CDS
T02163
Name
(GenBank) Similar to Possible global transcription activator SNF2L1 (SWI/SNF related matrix associated actin dependent regulator of chromatin subfamily A member 1)
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
Os05g0150300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dosa03021
]
Os05g0150300
03036 Chromosome and associated proteins [BR:
dosa03036
]
Os05g0150300
Transcription machinery [BR:
dosa03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
Os05g0150300
Chromosome and associated proteins [BR:
dosa03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
Os05g0150300
RSF complex
Os05g0150300
WICH complex
Os05g0150300
B-WICH complex
Os05g0150300
NORC complex
Os05g0150300
BRF complex
Os05g0150300
NuRF complex (fruit fly)
Os05g0150300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
SLIDE
Helicase_C
ResIII
HAND
HDA2-3
Myb_DNA-binding
DEAD
DBINO
CHDII_SANT-like
AAA_14
Motif
Other DBs
NCBI-ProteinID:
BAF16578
RAP-DB:
Os05g0150300
UniProt:
B9FMH3
LinkDB
All DBs
Position
5
Genome browser
AA seq
1158 aa
AA seq
DB search
MGKPGKYGDGDDDDSEEEQLSPSSSAGEEEEEEVEEEEGEEQQEEQGEEEEGFSGDEEEQ
EVEGEADGEQVEEEEEEESSVGEEEAEAEGEEEEEEVEEEQGAGEEEEEEVDEEEIEAVT
TGAGGDDDDEEVGDDGGAEEESQSTEDDEVAAGKDGGGEDGDKLEDATGNAEIGKRERAK
LREMQKLKKHKIQEILDAQNKAIDADMNNKGKGRLKYLLQQTEIFAHFAKGNQSTEKKSR
GRGRHASKMTEEEEDEEYLKEEEDALDGAGGTRLVSQPSCIKGKMRDYQLAGLNWLIRLY
ENGINGILADEMGLGKTLQTISLLGYLHEFRGITGPHMVVAPKSTLGNWMKEIQRFCPVL
RAIKFLGNPEERNHIRENLLVPGKFDVCVTSFEMAIKEKTALKRFSWRYIIIDEAHRIKN
ENSLLSKTMRIYNTNYRLLITGTPLQNNLHELWSLLNFLLPEIFSSAETFDDWFQISGEN
DQHEVVQQLHKVLRPFLLRRLKSDVEKGLPPKKETILKVGMSEMQKQYYRALLQKDLEVV
NAGGERKRLLNIAMQLRKCCNHPYLFQGAEPGPPYTTGDHLIENAGKMVLLDKLLPKLKE
RDSRVLIFSQMTRLLDILEDYLMYKGYQYCRIDGNTGGEDRDASIEAFNKPGSEKFVFLL
STRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTEYTIEEKV
IERAYKKLALDALVIQQGRLAEQKAVNKDELLQMVRFGAEMVFSSKDSTITDEDIDRIIA
KGEEATAQLDAKMKKFTEDAIKFKMDDTAELYDFDDDKDENKLDFKKLVTDNWIEPTSRR
ERKRNYSESDYFKQALRQGAPAKPREPRIPRMPHLHDFQFFNTQRLNELYEKEVKYLVQA
NQKKDTVGEGDDEDQLEPLTVEEQEEKEQLLEEGFSTWTRRDFNTFIRACEKYGRNDIKN
ISSEMEGKTEEEVQRYAKVFQERYKELNDYDRVIKNIEKGEARIYRKDEIMKAIGKKLDR
YKNPWLELKIQYGQNKGKLYNEECDRFMLCMVHKLGYGNWDELKAAFRMSPLFRFDWFVK
SRTTQELARRCETLIRLVEKENQEYDERERLARKDKKNMSPAKRSSSRSLDTPPQSSSKR
RRQSYTEANAGSGRRRRG
NT seq
3477 nt
NT seq
+upstream
nt +downstream
nt
atggggaagccggggaagtatggcgacggcgacgacgacgactcggaggaggagcagctc
tccccttcgtcttccgccggcgaggaggaggaggaggaggtagaagaggaagagggggag
gagcagcaggaggagcagggggaggaggaggaggggtttagcggggacgaggaggagcag
gaggtggagggtgaggcggatggggagcaagtggaggaggaggaagaggaggagtctagt
gtcggggaggaggaagcagaggcggagggtgaggaggaggaagaggaggtggaggaggag
cagggggctggggaagaggaagaggaggaggttgatgaggaggagatcgaggcggtcacc
accggcgccggaggggacgacgacgacgaagaagtgggcgatgacgggggcgcggaggag
gagtcgcagtccacggaggacgacgaggtcgccgccgggaaggatggcggcggtgaagat
ggcgacaagttggaagatgctactggaaacgcagagatcgggaagcgggagcgagcaaag
ctcagggagatgcaaaagctgaagaagcacaaaatccaggaaatactggatgcccaaaat
aaggccattgatgctgacatgaacaacaaggggaagggacgtctgaagtatctcctgcag
caaactgaaatatttgctcattttgcgaaaggaaaccaatcgacagagaagaaatcacgt
ggaaggggacgtcatgcatcaaagatgacagaggaggaagaagatgaggagtatctcaag
gaggaggaagatgcccttgatggtgcaggagggacccgtctggtttcacaaccatcatgc
ataaaaggaaagatgagagattaccaactagctggacttaattggctcatacgcttgtat
gagaatggcatcaatggaatattggctgatgagatgggtcttggaaaaacccttcaaact
atatcactgcttggatatttgcatgagtttagaggaataaccggtccccacatggttgtt
gcaccaaagtccactcttgggaactggatgaaggaaatacaacggttttgtcctgttctg
cgtgctatcaagttcttaggaaaccccgaagaaaggaaccatatccgggaaaatttgtta
gtcccagggaagtttgacgtctgtgttactagttttgaaatggcaattaaagaaaaaact
gcattgaagcgtttcagctggcgttatattattattgatgaagcccaccggataaaaaat
gaaaattcccttctctctaagactatgaggatttacaatactaattatcgtctcctcatt
acgggcactccactacagaataatcttcatgaactttggtctcttctcaacttcttgttg
cctgaaatatttagctctgctgagacttttgatgattggttccaaatctcaggggaaaat
gatcaacatgaagttgttcagcagcttcataaggttcttcgtccatttctgcttcggagg
cttaaatctgatgttgagaaaggtttaccaccaaaaaaggaaactatacttaaagttgga
atgtctgagatgcaaaaacaatattatcgtgctctgcttcagaaagatctggaggttgtc
aatgccggtggtgaacgcaaacgccttcttaacatagccatgcaattgcggaagtgctgc
aaccatccatatttattccaaggtgctgagcctggtccaccctataccactggagaccat
ctaattgagaatgcaggaaaaatggttctgttagataaattacttcccaagctaaaggaa
cgtgattccagagtacttattttctcacagatgactaggctcttggacatcttggaagat
tatctgatgtacaaggggtatcaatattgccgaattgatgggaatactggtggtgaagat
cgtgatgcttcgattgaagctttcaacaagccagggagtgaaaaatttgttttcttgctt
tcgactagggcaggtggtcttgggataaatcttgctactgctgatgttgttattctttat
gacagtgactggaatcctcaagtggatctgcaagcgcaagatcgtgcacatagaattggt
caaaagaaagaagttcaagtttttcgtttctgcactgagtatacaattgaggaaaaggtg
attgagagagcttataagaagcttgccctggatgctttggtcatacaacagggtcgattg
gcagagcagaaagctgtcaataaggatgagctattgcagatggtcagatttggtgctgaa
atggtattcagctccaaggatagcacaataacagatgaagatattgaccgcatcatcgct
aagggagaagaagcaacagcacaacttgatgcaaaaatgaagaagttcacagaagatgct
attaagttcaaaatggatgacactgctgaactgtatgattttgatgatgataaggatgaa
aacaaacttgattttaagaagttggtcactgacaactggatagagccaaccagcagaaga
gaaaggaagcgaaactactctgagtctgattatttcaagcaagcacttcgccaaggtgca
ccagcaaaacctagggaaccgagaattcctcgaatgccacacttgcatgatttccagttc
ttcaacactcagagactcaatgaattatatgagaaggaagtcaaataccttgtgcaagca
aatcagaaaaaggatacggttggtgagggtgatgacgaagatcaactggaaccgttgact
gtggaggagcaagaagagaaagagcagctattggaagagggcttttcgacatggacaagg
agggacttcaatacattcatccgtgcttgtgagaagtacggtcgtaatgacataaagaac
atatcctctgaaatggaggggaaaacagaagaggaggtgcagcggtacgctaaagttttc
caggaaagatacaaggaattaaatgattatgaccgagttattaagaacattgagaaagga
gaagcaaggatataccggaaggatgagattatgaaagctattgggaaaaagctagaccgc
tataagaacccttggttagagttgaaaattcagtatggccagaataaagggaagttatac
aacgaagaatgtgatcgttttatgttatgcatggtgcacaaactcggatacggaaactgg
gatgaactgaaagcagcctttcgcatgtcgcccttgttccgatttgattggtttgtgaag
tctagaacaacccaagagctagctaggaggtgcgagaccctcattcgtctagtggagaag
gagaaccaagaatatgatgagcgtgagagattggccaggaaagataagaagaatatgtcg
ccagcaaagcgttcttcatcaaggtcgctcgatacccctccacaaagctcttcgaagagg
aggcgccagtcctacactgaagccaatgcaggctcgggaaggagaaggcgagggtga
DBGET
integrated database retrieval system
