Oryza sativa japonica (Japanese rice) (RAPDB): Os05g0160200
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Entry
Os05g0160200 CDS
T02163
Name
(GenBank) Ubiquitin
KO
K02977
ubiquitin-small subunit ribosomal protein S27Ae
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa03010
Ribosome
dosa04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
Os05g0160200
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
Os05g0160200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
dosa03011
]
Os05g0160200
04121 Ubiquitin system [BR:
dosa04121
]
Os05g0160200
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dosa04147
]
Os05g0160200
Ribosome [BR:
dosa03011
]
Ribosomal proteins
Eukaryotes
Small subunit
Os05g0160200
Archaea
Os05g0160200
Ubiquitin system [BR:
dosa04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
Os05g0160200
Exosome [BR:
dosa04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Os05g0160200
Exosomal proteins of colorectal cancer cells
Os05g0160200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Ribosomal_S27
Rad60-SLD
Ubiquitin_2
Rad60-SLD_2
Dsc3_N
Plexin_RBD
Thioredox_PDIA6_C
DUF2604
UBL_UBAC1
TBK1_ULD
IBR
Ubiquitin_5
Fer2_3
OTU1_UBXL
Motif
Other DBs
NCBI-ProteinID:
BAF16634
RAP-DB:
Os05g0160200
UniProt:
P51431
LinkDB
All DBs
Position
5
Genome browser
AA seq
155 aa
AA seq
DB search
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKHKKVKLAVLQFYKVDDATGKVTRLRK
ECPNNDCGAGTFMANHFDRHYCGKCGLTYVYNQKA
NT seq
468 nt
NT seq
+upstream
nt +downstream
nt
atgcagatcttcgtgaagaccctgacggggaagaccatcacgctggaggtggagtcctcg
gacaccatcgacaacgtgaaggccaagatccaggacaaggaagggatccccccggaccag
cagcgcctcatcttcgccggcaagcagctcgaggatggccgcaccctcgccgactacaac
atccagaaggagtccaccctccacctcgtgctccgcctccgcggcggcgccaagaagcgc
aagaagaagacgtacaccaagcccaagaagatcaagcacaagcacaagaaggtgaagctc
gccgtgctccagttctacaaggtggacgacgccaccggcaaggtcaccaggctcaggaag
gagtgccccaacaacgactgcggcgcgggcaccttcatggccaaccacttcgatcgccac
tactgcggcaagtgcggcctcacctacgtctacaaccagaaggcctag
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integrated database retrieval system
