Oryza sativa japonica (Japanese rice) (RAPDB): Os05g0182600
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Entry
Os05g0182600 CDS
T02163
Name
(GenBank) Similar to SSRP1 protein
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dosa03000
]
Os05g0182600
03036 Chromosome and associated proteins [BR:
dosa03036
]
Os05g0182600
Transcription factors [BR:
dosa03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
Os05g0182600
Chromosome and associated proteins [BR:
dosa03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
Os05g0182600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH1_SSRP1-like
POB3_N
SSrecog
Rttp106-like_middle
HMG_box
HMG_box_2
HMG_WDHD1
CDC45
YL1
Motif
Other DBs
NCBI-ProteinID:
BAF16734
RAP-DB:
Os05g0182600
UniProt:
Q65WY8
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Position
5
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AA seq
640 aa
AA seq
DB search
MTDGHHFNNISLGGRGGNNPGQFKLYSGGLAWKRQGGGKTIEVEKSDITSVTWMAIPRSY
QLGVSTKEGLFYRFFGFREQDISSLTNFMEKNMRITPEEKQLSVGGHNWGGIEINGNMLS
FNVGSKEAFEVSLADVAQTQMQGKTDVVLEFHVDDTTGGNEKDSLMDLSFHVPTSNTQFP
GDENRPSAQVLWQAILNKADVGSSEEAVVTFDGIAILTPRGRYSVELHLSFLRLQGQAND
FKIQYSSILRLFVLPKSNNPHTFVVITLDPPIRKGQTLYPHIVIQFETEAVVQRDLTLSD
EVLAEKYKDRLENSYQGLIHEVFSKVLRGLSGAKVTRPSTFRSCQDGYAVKSSLKAEDGL
LYPLEKGFFFLPKPPTLILHEEIEYVEFERHGAGGASISSHYFDLLVKLKNDQEHLFRNI
QRNEYHNLFNFISGKHLKILNLGEAQGRAGGVTAVLQSTDDDAVDPHLERIRNQTGDDES
DEEDEDFVADKDDSGSPTDDSGEEGSDASLSGGEKEKSSKKEASSSKAPLKKRKPKGGDA
AEGSEKRKPKKKKDPNAPKRAIAPFMYFSKAERANLKNSNPELATTEIAKKLGERWQKMT
AEEKQPYVEQSQVDKKRYAEESAAYRGAAAMDVDSGPASD
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atgacggacggccaccacttcaacaacatatccctcggcggccgcggcggcaacaaccct
ggccagtttaaactttattcgggaggacttgcatggaagaggcaaggtggaggaaagacc
attgaggttgaaaagtctgatatcacttctgtgacatggatggcaatccccagatcctat
cagcttggtgtttcaacaaaggagggcctcttctacaggttctttggcttccgtgaacag
gatatcagttcattgactaacttcatggaaaagaacatgagaatcacaccagaggagaag
cagctttctgttggtggacataattggggcggaattgaaatcaatggcaatatgcttagc
tttaatgttggttcaaaggaagcatttgaagtctctctagcagacgtagcacaaactcag
atgcaaggaaaaacagatgttgttctggagtttcatgtggatgatactactggtggtaat
gagaaagattcattgatggatttaagctttcatgtaccaacttcaaatactcaattccct
ggagatgagaatcgtccttcagctcaggttttatggcaggctatcttgaataaggctgat
gttggctcatcagaggaagctgttgttacatttgatggaattgctattcttactccaaga
ggtcgatacagtgttgaacttcatctgtcattcttacgactccaaggacaagctaatgat
ttcaaaattcaatatagcagtattcttcgcctctttgttttaccaaagtcaaataatcct
catacctttgtggttatcactcttgatccaccaattcgcaaaggacagacattatatcct
cacattgttattcagtttgaaactgaagcagtcgttcaaagggatctgacattaagtgat
gaggttttggctgaaaagtacaaggatagactggagaactcttaccagggtctgatacat
gaagtgttctccaaggtccttcgtggcctatctggtgctaaagttacgaggccaagcacg
ttccgcagttgtcaagatggatatgcagtgaaatcatcactcaaagctgaagatggattg
ctctatccgctggagaagggcttcttctttctaccaaagcccccaacactcattctgcat
gaggagattgagtatgttgaatttgagcgacatggtgctgggggtgctagtatctcatct
cactattttgatctcctggtcaagctgaaaaatgatcaagaacatctattcagaaatatc
caaagaaatgaataccataatctcttcaatttcatcagtggcaagcatttgaaaatcttg
aatcttggagaagctcaaggtagagctggtggcgttacagctgttcttcagagcactgat
gatgatgctgttgatcctcatctggagcggatcagaaatcagactggcgatgatgagagt
gatgaagaggatgaagattttgtggcggacaaggacgacagtggatctcctactgatgat
tctggagaggagggttctgacgctagtttaagtggaggagaaaaggagaaatcttccaaa
aaggaagctagtagctcaaaggcgcctttgaagaagaggaagccaaagggtggggatgcg
gcggaaggctcggagaaaagaaagccaaagaaaaagaaggatcctaatgcccctaaaaga
gcaattgcaccattcatgtacttctcaaaagctgagcgagctaatctgaagaacagcaat
ccggagctggctaccacagagattgcgaagaagcttggggagaggtggcaaaagatgaca
gccgaggagaagcagccatacgtcgagcagtctcaagttgacaagaagcgctacgcggag
gagtcagccgcctaccgcggggcggctgccatggatgtggactccggccctgcttcggac
tga
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