Oryza sativa japonica (Japanese rice) (RAPDB): Os05g0198700
Help
Entry
Os05g0198700 CDS
T02163
Name
(GenBank) REX1 DNA Repair family protein
KO
K10845
TFIIH basal transcription factor complex TTD-A subunit
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa03022
Basal transcription factors
dosa03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Os05g0198700
09124 Replication and repair
03420 Nucleotide excision repair
Os05g0198700
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dosa03021
]
Os05g0198700
03400 DNA repair and recombination proteins [BR:
dosa03400
]
Os05g0198700
Transcription machinery [BR:
dosa03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
Os05g0198700
DNA repair and recombination proteins [BR:
dosa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
Os05g0198700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb5
Motif
Other DBs
NCBI-ProteinID:
BAF16790
RAP-DB:
Os05g0198700
UniProt:
Q0DK33
LinkDB
All DBs
Position
5
Genome browser
AA seq
121 aa
AA seq
DB search
MVSLQQAQHTTASLDTCEHSPPLLAPPGRVVAGDLHRASRAGERIMVAFCSPKSRNMVNA
IKGLFISCDVPMAQFIVNLNASMPASDKFILHMLDPTHMFVQPHVAEMIREEAVATESFP
K
NT seq
366 nt
NT seq
+upstream
nt +downstream
nt
atggtttctttacagcaagctcaacatactactgcaagtcttgacacttgtgagcattct
cctccgctccttgcgccgccgggacgagtcgtggccggcgatctccatcgggcgagcaga
gcaggggagaggatcatggtggcattctgttctccaaagagcagaaacatggttaatgca
ataaaggggttgttcatctcctgcgatgtaccgatggcacagttcattgttaatctgaat
gcttcaatgcccgcttcggacaagttcatcctgcacatgcttgaccctacacacatgttt
gtgcagcctcatgtggcggagatgatcagagaagaagctgtagctactgaaagcttccct
aaatag
DBGET
integrated database retrieval system
