Oryza sativa japonica (Japanese rice) (RAPDB): Os05g0256000
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Entry
Os05g0256000 CDS
T02163
Name
(GenBank) Similar to TGF-beta receptor-interacting protein 1
KO
K03246
translation initiation factor 3 subunit I
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
dosa03012
]
Os05g0256000
Translation factors [BR:
dosa03012
]
Eukaryotic type
Initiation factors
eIF-3
Os05g0256000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EIF3I
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_TEP1_C
Beta-prop_TEP1_2nd
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT122_1st
Beta-prop_EML
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_WDR75_1st
Beta-prop_SCAP
WD40_MABP1-WDR62_2nd
Beta-prop_EIPR1
Beta-prop_SPT8
WD40_RFWD3
WD40_MABP1-WDR62_1st
Beta-prop_VPS8
NBCH_WD40
Beta-prop_Nup120_160
Beta-prop_IFT140_1st
Motif
Other DBs
NCBI-ProteinID:
BAF16950
RAP-DB:
Os05g0256000
UniProt:
Q0DJM3
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Position
5
Genome browser
AA seq
326 aa
AA seq
DB search
MRPILMKGHERPLTFLRYNRDGDLLFSCAKDHTPNVWFADNGDRLGTYSGHNGAVWSCDV
SRDSTRLITGSADQTAKLWDVQTGAELFTFRFDAPARSVEFAIGDGLAVITTDNFMGNVP
TAQVKRIADDPDDQSEESLLVISGIKGRINRAVWGPLNRTIITAGEDATIRIWDTETGTC
LNESDKEQGHQKTITSLSKSADWSHFLTGSLDKSAKLWDTRTLTLIKTYVTERPVNAVDI
SPLLDHVVIGGGQDAMNVTMTDRRAGKFEAKFFHKILQEEIGGVKGHFGPINALAFNPDG
RSFSSGGEDGYVRLHHFDSDYFNIKI
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgaggccgatcctgatgaaggggcacgagcggccgctgacgttcctccggtacaaccgc
gacggggacctcctcttctcgtgcgccaaggaccacacccccaacgtctggttcgccgac
aacggcgaccgcctcggcacctacagcggccacaacggcgccgtctggtcctgcgacgtc
tcccgcgactccacccgcctcatcaccggcagcgccgaccagaccgccaagctctgggac
gtccagaccggggcggagctcttcaccttccgcttcgacgcccccgcccgctccgtcgag
ttcgccatcggcgacggcctcgccgtcatcaccaccgacaacttcatgggcaacgtgccc
accgcccaggtcaagcgcatcgccgacgaccccgatgaccagtcggaggagtctcttctc
gtgatttctggcatcaaggggaggattaacagggctgtatgggggccgttgaacaggacc
atcatcaccgccggtgaggatgccaccatccgcatttgggacactgagactggaacatgt
ctgaatgagtcagacaaagaacaaggacaccagaaaacaattacttcactttcaaaatct
gcagattggtcacatttcctaacaggctccttggataagtctgctaagctatgggataca
agaactctgaccctgatcaagacatatgtcaccgagcgacctgttaatgctgttgacatt
tctcctcttctagaccatgtggttatcggaggtggtcaagatgcgatgaatgtgactatg
acagatcgtcgagcgggaaaatttgaagcgaaattctttcacaagattttgcaagaggaa
attggtggtgtaaaaggccattttggaccaattaacgcactggcatttaatcctgatgga
cggagcttctcgagtggtggtgaagatggatatgtaaggctgcaccattttgattctgac
tacttcaacatcaagatttaa
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