Oryza sativa japonica (Japanese rice) (RAPDB): Os05g0347000
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Entry
Os05g0347000 CDS
T02163
Name
(GenBank) TAFII55 protein conserved region domain containing protein
KO
K03132
transcription initiation factor TFIID subunit 7
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Os05g0347000
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dosa03021
]
Os05g0347000
03036 Chromosome and associated proteins [BR:
dosa03036
]
Os05g0347000
Transcription machinery [BR:
dosa03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
Os05g0347000
Coactivators
SAGA/TFTC/STAGA complex
Os05g0347000
Chromosome and associated proteins [BR:
dosa03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
Os05g0347000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAFII55_N
Motif
Other DBs
NCBI-ProteinID:
BAF17179
RAP-DB:
Os05g0347000
UniProt:
B9FP16
LinkDB
All DBs
Position
5
Genome browser
AA seq
200 aa
AA seq
DB search
MEEQFILRVPPSVAERIERLMNESAAASSSSNPEDASLDLSFSEDGRNGTFMIGNESFPA
SLLDLPTVVESYKTYDDSVLIKTADIGQMIMVREEEDPAPEGVEYKHGLTPPMRDARRRR
FRREPDLNAELVHRVEKDLISIMHGVSINQNASAILRAGEGGDRKKAGPAPATKPNVKQP
AANGEEAEAERSDSDESVDP
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atggaggagcagttcatcctccgggttcccccctccgtcgcggagcggatcgagcgcctc
atgaacgaatccgccgccgcctcctcctcttccaaccccgaagacgcgtccctcgacctc
tccttctcagaggatggaagaaatggcacatttatgattgggaatgaaagctttcctgca
tcactcttggatctcccaactgttgtggagtcatacaagacatatgatgattcagtgcta
attaaaacagctgatattggtcagatgattatggtaagagaagaagaagatcctgctcca
gaaggagttgaatacaagcatggtcttactcctccaatgagggacgcacgcaggcggcgt
ttccgcagggagcctgatttgaatgccgaacttgttcaccgagttgagaaggatctcatt
agtattatgcatggggtatctatcaaccagaatgccagtgcaattctaagggcaggagaa
ggtggcgatcgtaagaaagcgggaccagctccagcaaccaaacctaatgtcaaacaacct
gctgcaaatggcgaagaagctgaggcagagaggagtgactctgatgagtccgttgacccg
tag
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integrated database retrieval system
