Oryza sativa japonica (Japanese rice) (RAPDB): Os05g0407200
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Entry
Os05g0407200 CDS
T02163
Name
(GenBank) WD40-like domain containing protein
KO
K11801
DDB1- and CUL4-associated factor 11
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dosa04121
]
Os05g0407200
Ubiquitin system [BR:
dosa04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
Os05g0407200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
WDR55
Beta-prop_TEP1_2nd
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_SCAP
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
PROPPIN
Beta-prop_SPT8
WDR54
Beta-prop_NUP159_NUP214
Motif
Other DBs
NCBI-ProteinID:
BAF17433
RAP-DB:
Os05g0407200
UniProt:
B9FIE0
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Position
5
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AA seq
463 aa
AA seq
DB search
MGYGMSRMEEEYSEHEDQNNGGSNSQVNNEFLNTHNDIFHMTQIRSGPSESLRKSIGTSK
DVISTTRLLSGREINSSGNGKFSSVDRAFLLGRYLPVDGPEIVDRMDSRAYVSQFSADGS
LFVAGFQGSHIRIYDVDKGWKVHRDIHARSLRWTISDASLSPDQQFLVYSSLAPIIHIVN
VGTAAKQSYANITDIHDGLDFSQHEDVRYTFGIFSVKFSSDGRELVAGSNDDSIYVYDLV
ANKLTLRLPAHHSDVNTVAFADETGHLIYSGSDDNLCKVWDRRCLSTEEPAGVLTGHLHG
ITHIDSRGDGRCFISNGKDQAIKMWDIRKMTSNADSYEDRTSNWDYRYSRYPQQYKQLKH
PHDQSIATYWGHSVLRTLIRCYFSPAYSTGQKYIYTGSYDSSVCIYDVVSGSQVAKLKGY
HQLAIRDCSWHPFDPMLVSSSWDGRVAKWSRSSCQQEETTDLD
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgggttatggcatgagtaggatggaggaggaatacagcgagcatgaagatcagaataat
ggtggatctaattcacaagtgaataatgagttcttaaacacacataatgatattttccat
atgactcaaataagatcaggacctagtgaaagtcttcgcaagtctattggtacaagcaaa
gatgtgatatcgacaaccaggttattgtctggaagggaaattaattcttcaggaaatggg
aagttctcttcagttgatcgtgcgtttcttcttggtcgttatcttccagttgatggccct
gaaatagtggacaggatggattcccgagcttatgtttcacagttttctgctgatggatct
ctttttgttgctggttttcagggaagccacataagaatatatgatgttgataaaggttgg
aaagtacatagggacattcatgctagaagtttgagatggaccattagtgacgcatcactt
tcccctgatcaacagtttcttgtctactccagtctagcaccgattatccatatcgtcaat
gttgggactgctgcaaaacaatcatatgctaatatcactgacatccacgatggactagat
ttttcacagcatgaagatgttcgatatacatttggaatattttctgttaaattctcttct
gatggccgagagcttgttgctggcagtaacgatgattcaatatatgtttatgaccttgtg
gcaaacaaactaacgttgcgtttgcctgctcatcattctgatgtcaacacagtagcattt
gctgacgaaactggccatctcatatattctggaagtgatgataatttatgcaaggtctgg
gataggcgatgtttatccacagaagaacctgctggagttttgactgggcatttgcatggc
attactcatattgatagccgtggagatggtcggtgtttcatatcaaatggaaaagaccaa
gctatcaaaatgtgggacatcaggaaaatgacatccaatgctgatagttatgaagacaga
acctcaaattgggactatagatattcaagatatccacaacagtataagcaactaaagcat
ccccatgatcagtcaatagctacatactggggccattcagttcttcgtacattgatccgt
tgctatttttctcctgcatatagcacaggacagaagtacatatatacaggatcctatgat
tctagtgtttgtatctacgatgtggtgagcggatcacaagttgcaaaactcaaaggatat
catcagctggcaattcgagactgcagttggcatcccttcgaccctatgcttgtcagctca
tcctgggacggccgggttgccaagtggtccaggtcttcctgtcagcaagaagagactact
gatctcgattga
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