KEGG   Oryza sativa japonica (Japanese rice) (RAPDB): Os05g0427300
Entry
Os05g0427300      CDS       T02163                                 
Name
(GenBank) Similar to RNA binding protein (Fragment)
  KO
K12831  splicing factor 3B subunit 4
Organism
dosa  Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:dosa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    Os05g0427300
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:dosa03041]
    Os05g0427300
Spliceosome [BR:dosa03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    Os05g0427300
 Complex B
    Os05g0427300
 Complex C
   U2 SnRNP specific factors
    Os05g0427300
SSDB
Motif
Pfam: RRM_1
Other DBs
NCBI-ProteinID: BAF17521
RAP-DB: Os05g0427300
UniProt: A0A8J8Y7X5
LinkDB
Position
5
AA seq 187 aa
MSRNPGCTVFIGNLDEKVPERVLYEILIQVGRVVDLHIPRDKETNRSKGYAFAEYETEEI
AQYAVKLFSGLVRLHNRTLRFAISGQDKQSSNGNIPVTPKVNPIPPPKPAQLMRSSDTPA
SQHTVVNGRIAGISPNHSYSAHSEAPSGISSRGLSNGTYEYSRRVFGSVLNDVSRRTDRQ
PIPYPSY
NT seq 564 nt   +upstreamnt  +downstreamnt
atgtcgaggaatccgggctgcaccgtcttcataggtaacttggatgaaaaggtacctgag
agggtcttgtatgagattcttattcaggtaggtcgtgttgtagacctacacataccacgt
gacaaggaaactaatcgctccaaaggttatgcttttgctgagtatgaaacagaggagatt
gcccagtatgctgttaagctattttctggccttgttcgtcttcataatagaacacttaga
tttgcgatttctggacaagacaagcaatcttctaatggaaatattcctgtaacacctaaa
gtgaaccctataccgccaccaaagccggctcagctaatgagatctagtgatactcccgca
tcgcaacatacagtggtaaatggcaggattgctggtatttctccaaaccattcttatagt
gcgcactctgaggcaccaagtgggatatcgagtagaggattaagcaatggtacatacgaa
tatagtagacgcgtatttggttctgttctgaatgacgttagccgtcgtactgacaggcaa
ccaattccatacccgtcctactag

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