KEGG   Oryza sativa japonica (Japanese rice) (RAPDB): Os05g0429000
Entry
Os05g0429000      CDS       T02163                                 
Name
(GenBank) Similar to Hydroxymethyltransferase
  KO
K00600  glycine hydroxymethyltransferase [EC:2.1.2.1]
Organism
dosa  Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa00260  Glycine, serine and threonine metabolism
dosa00460  Cyanoamino acid metabolism
dosa00630  Glyoxylate and dicarboxylate metabolism
dosa00670  One carbon pool by folate
dosa01100  Metabolic pathways
dosa01110  Biosynthesis of secondary metabolites
dosa01200  Carbon metabolism
dosa01230  Biosynthesis of amino acids
dosa01240  Biosynthesis of cofactors
dosa04981  Folate transport and metabolism
Module
dosa_M00532  Photorespiration
Brite
KEGG Orthology (KO) [BR:dosa00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00630 Glyoxylate and dicarboxylate metabolism
    Os05g0429000
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    Os05g0429000
  09106 Metabolism of other amino acids
   00460 Cyanoamino acid metabolism
    Os05g0429000
  09108 Metabolism of cofactors and vitamins
   00670 One carbon pool by folate
    Os05g0429000
 09150 Organismal Systems
  09154 Digestive system
   04981 Folate transport and metabolism
    Os05g0429000
Enzymes [BR:dosa01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.2  Hydroxymethyl-, formyl- and related transferases
    2.1.2.1  glycine hydroxymethyltransferase
     Os05g0429000
SSDB
Motif
Pfam: SHMT Beta_elim_lyase WDR55 Beta-prop_THOC3
Other DBs
NCBI-ProteinID: BAF17529
RAP-DB: Os05g0429000
UniProt: Q5TKJ3
LinkDB
Position
5
AA seq 587 aa
MLDRATGGRRRAAGEGMDHRPDLSLALHPPPPPEGSSAAAAEEVGEEEAEGGEGRFSLMG
QPLFLKRPRPRPPRPPRARGVGDDVDVDVDDDSSPCCSSSCLSPAAKRRAAAGGLEARRA
AVRAWGCQPLTEADPDVHELMERERRRQAGGVELIASENYACRAVLDALGSHLTNKYSEG
LPGARYYCGNQHIDAIERLCCDRALAAFGLDPSRWGVNVQPYSCTSANFAVYTGLLLPND
RIMGLDSPSGGHVSHGYYTPSGKKVSGASIFFENLSYRVNPHTGYIDYDKVEEKAVDFHP
KILICGASSYPRDWDYARMRLVADKCGAVLMCDMAQISGLVAAKECRNPFDYCDIVTSTT
HKSLRGPRGGIIFFRKGKNLRKRVGSLTQVVENDQYDFEDRINFAVFPSMQGGPHNNHIA
ALAIALKQVAMPEFKAYIQQVKKNAQALAMALLRRKCRLVTGGTDNHLMLWDLRTFGLTG
KNFEKVCEACHISLNKTPIYGDNGSISPGGVRIGTPAMTTRGCLESDFEIMAEFLLRAAH
IASIVLKEHGRLQKDFLKGLENNNDIIELRNQVETFALQFAMPGFDV
NT seq 1764 nt   +upstreamnt  +downstreamnt
atgctcgatcgcgcgacgggggggcggcgccgcgccgcgggcgaagggatggaccatcgg
cccgacctgtccctcgccctccacccgccgccgccgcccgagggctcgtccgccgccgcc
gccgaggaggtgggggaggaggaggccgaaggcggcgaggggcggttctccctcatgggc
cagccgctcttcctcaagcggccgcggccgcggcccccgcgcccgccccgcgcgcgcggg
gtgggggacgacgtcgacgtcgacgtcgacgacgactcatccccgtgctgctcctcctcc
tgcctctcgcccgcggcgaagcggcgggcggcggcgggaggactcgaggcgcgccgcgcg
gccgtgcgcgcgtggggatgccagccgctcacggaggcggacccggacgtgcacgagctg
atggagcgggagcggcgccggcaggcgggcggggtcgagctcatcgcctccgagaactac
gcctgccgcgcggtgctcgacgcgctcggcagccacctcaccaacaagtactccgagggc
ctccccggcgcgcgctactactgcggcaaccagcacatcgacgccatcgagcgcctctgc
tgcgaccgcgcgctcgccgccttcggcctcgacccgtcgcgctggggcgtcaacgtgcag
ccctactcctgcacctccgccaacttcgccgtctacacggggctcctcctccccaacgac
aggatcatgggcctcgactcgccgtccggcggccacgtcagccacgggtactacacgccc
agcggcaagaaggtctccggcgcctccatcttcttcgagaacctctcctacagggtgaac
ccgcacaccgggtacatcgattacgataaggtagaggagaaggccgtggatttccacccc
aagattctcatctgcggcgcgagctcgtatccaagggattgggactatgcacggatgcgg
cttgttgctgataagtgcggcgcagtactcatgtgtgacatggcacaaatcagtggtctt
gtggcagcgaaggaatgtcgaaatccctttgactactgcgatattgttacttcaaccaca
cacaagagcttgaggggtcctagaggtggtataatatttttcaggaaagggaaaaatcta
aggaaacgggtcggatctttaactcaagtggttgaaaatgatcagtatgattttgaggac
cgtataaattttgctgttttcccttcaatgcaaggtggaccccacaataaccatattgct
gctctggctatagctctaaaacaagtagccatgccagaattcaaagcatacattcaacaa
gtcaagaaaaatgcccaagctttggcgatggccttgctcaggaggaaatgcagactggtt
actggtggcacagataatcatttgatgctctgggacctaagaacatttggcttgacaggg
aagaactttgagaaggtctgtgaggcatgtcatatctctcttaataaaacaccaatatat
ggagataatggttcgatttctcctggaggtgtgcggattggaactcctgccatgacaact
agaggttgcttggagagtgactttgagataatggcagaattccttttgagggcagcacat
atagcaagtattgttttgaaggagcatggaaggcttcagaaggattttctgaaaggtctg
gagaacaataatgacattattgaactccggaatcaggtggagacatttgccttacaattt
gccatgccgggatttgatgtataa

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