KEGG   Oryza sativa japonica (Japanese rice) (RAPDB): Os05g0516600
Entry
Os05g0516600      CDS       T02163                                 
Name
(GenBank) Small GTP binding protein
  KO
K07897  Ras-related protein Rab-7A
Organism
dosa  Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa04144  Endocytosis
dosa04145  Phagosome
dosa04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:dosa00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    Os05g0516600
   04145 Phagosome
    Os05g0516600
   04148 Efferocytosis
    Os05g0516600
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:dosa04131]
    Os05g0516600
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:dosa04147]
    Os05g0516600
   04031 GTP-binding proteins [BR:dosa04031]
    Os05g0516600
Membrane trafficking [BR:dosa04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Rab GTPases
    Os05g0516600
Exosome [BR:dosa04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   Os05g0516600
  Exosomal proteins of other body fluids (saliva and urine)
   Os05g0516600
  Exosomal proteins of colorectal cancer cells
   Os05g0516600
  Exosomal proteins of bladder cancer cells
   Os05g0516600
GTP-binding proteins [BR:dosa04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab7/9 [OT]
    Os05g0516600
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU MMR_HSR1 Gtr1_RagA ATP_bind_1 RsgA_GTPase AAA_16 nSTAND3 AAA_7 Septin AAA_24 cobW AAA_22 NTPase_1 PduV-EutP ATPase_2 SRPRB MCM NACHT AAA_14 G-alpha ATP-synt_ab NB-ARC DAP3
Other DBs
NCBI-ProteinID: BAF17960
RAP-DB: Os05g0516600
UniProt: Q0DGR3
LinkDB
Position
5
AA seq 206 aa
MASRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ
IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF
VLLGNKVDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKDGTNVEEAFQCIVKNALKNE
PEEELYVPDTVDVVGGNRAQRSSGCC
NT seq 621 nt   +upstreamnt  +downstreamnt
atggcttcgcgccgccgcaccctcctcaaggtcatcatcctcggcgacagcggggttggg
aagacgtccctgatgaaccaatatgtgaacaagaagttcagcaaccagtacaaggctacg
attggcgcggatttcctcaccaaggaggttcagttcgaggataggctcttcactttgcaa
atatgggatactgctggccaggaaaggtttcagagtcttggtgttgcattctaccgtgga
gcagattgctgtgttctagtttatgatgtcaattctatgaagtcatttgataatcttaac
aactggcgtgaagaatttctaattcaggcaagcccatcagaccctgataacttccctttt
gttcttttgggcaacaaagttgatgtagacggtggcaacagccgtgtggtctctgagaag
aaggcaaaggcatggtgtgcctctaaagggaatatcccatactttgagacatctgccaag
gatggtacaaacgtggaggaggctttccagtgcattgtaaagaatgctctgaagaatgaa
ccagaggaagaactgtatgtgccggacaccgtggatgtggtgggtggcaaccgggcccaa
agatcatcaggctgctgctag

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