KEGG   Oryza sativa japonica (Japanese rice) (RAPDB): Os05g0536900
Entry
Os05g0536900      CDS       T02163                                 
Name
(GenBank) Similar to RAB7A
  KO
K07897  Ras-related protein Rab-7A [EC:3.6.5.2]
Organism
dosa  Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa04142  Lysosome biogenesis
dosa04144  Endocytosis
dosa04145  Phagosome
dosa04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:dosa00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    Os05g0536900
   04145 Phagosome
    Os05g0536900
   04142 Lysosome biogenesis
    Os05g0536900
   04148 Efferocytosis
    Os05g0536900
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:dosa04131]
    Os05g0536900
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:dosa04147]
    Os05g0536900
   04031 GTP-binding proteins [BR:dosa04031]
    Os05g0536900
Enzymes [BR:dosa01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.2  small monomeric GTPase
     Os05g0536900
Membrane trafficking [BR:dosa04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Rab GTPases
    Os05g0536900
 Endosome - Golgi transport
    Os05g0536900
Exosome [BR:dosa04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   Os05g0536900
  Exosomal proteins of other body fluids (saliva and urine)
   Os05g0536900
  Exosomal proteins of colorectal cancer cells
   Os05g0536900
  Exosomal proteins of bladder cancer cells
   Os05g0536900
GTP-binding proteins [BR:dosa04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab7/9 [OT]
    Os05g0536900
SSDB
Motif
Pfam: Ras Roc Arf MMR_HSR1 Gtr1_RagA GTP_EFTU RsgA_GTPase AAA_16 Septin nSTAND3 AAA_22 AAA_7 cobW NTPase_1 PduV-EutP NB-ARC AAA_5 AAA_24 ATPase_2 NACHT MCM nSTAND1 AAA_14 AAA DAP3
Other DBs
NCBI-ProteinID: BAF18079
RAP-DB: Os05g0536900
UniProt: B9FLC1
LinkDB
Position
5
AA seq 206 aa
MASSRRRTLLKVIVLGDSGVGKTSLMNQYVNKKFSQQYKATIGADFVTKEVLIEDRLVTL
QIWDTAGQERFQSLGVAFYRGADCCMLVYDVNAKRSFNALNTWHDEFLTQASPSDPKHFP
FILLGNKIDIDAGNRRAIPEKKAKEWCVSKGNIPYFETSAKDDYNVDSAFLCIAKLALEH
EHDQDIYFKTVAQPAPDTEHTSGCAC
NT seq 621 nt   +upstreamnt  +downstreamnt
atggcgtcgtcgcggaggcggacgctgctcaaggtcatcgtcctcggcgacagcggggtg
gggaagacgtccctgatgaaccaatacgtgaacaagaagtttagccagcagtacaaggcg
acgatcggcgccgatttcgtcaccaaggaggttctcattgaagacaggcttgtcaccttg
cagatctgggacacggcaggacaggagaggtttcagagtctcggtgtggcgttctacaga
ggtgcagattgctgtatgctagtctacgatgtcaatgctaaaagatctttcaatgcactc
aacacctggcatgatgagttcctcacccaagctagcccatcagatcccaaacattttccc
ttcatattactcggcaacaagattgacatagatgccggaaacagacgtgccatccctgag
aagaaagcaaaagagtggtgcgtctccaaaggcaacattccgtatttcgaaacctctgcg
aaagacgactacaatgttgacagtgcttttctgtgcattgccaagcttgctctggagcat
gagcatgatcaggacatctacttcaagactgttgcacaaccagcccctgatactgaacat
accagcggatgtgcttgctag

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