Oryza sativa japonica (Japanese rice) (RAPDB): Os05g0553700
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Entry
Os05g0553700 CDS
T02163
Name
(GenBank) Similar to Syntaxin 71 (AtSYP71)
KO
K08506
syntaxin of plants SYP7
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
Os05g0553700
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dosa04131
]
Os05g0553700
Membrane trafficking [BR:
dosa04131
]
SNARE
SNAP-25[C] (Qc)
Syp7
Os05g0553700
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNARE
Ran-binding
TTRAP
Motif
Other DBs
NCBI-ProteinID:
BAF18178
RAP-DB:
Os05g0553700
UniProt:
A0A5S6R7L1
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Position
5
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AA seq
318 aa
AA seq
DB search
MSVIDILTRVDSICKKYDKYDVERLNGANVAGEDPFARLYGSIDADINECVEKAEAAKQE
KNRATVVALNAEIRRTKAKLVEEDLPKLQRLALKKVKGLTKEELATRSDLVAALPDRIQS
IPDGSSSAKKNGTWGASGSRTGGAIKFDTSDGNFDDEYFKGTEESNQFRREYEMRKMKQD
EGLDIIGEGLETLKNMASDMNEELDRQVPLMDEMDEKVDRANTDLKNTNVRLKETVLQLR
SSRNFCIDIVLLCVILGIAAYLYNVLKKVRPDCAMDLFSTSSGDGWMSFDVSTSCSLYFY
LICVIVVWCSSGTCEHPC
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtgatcgacatcctcacgcgggtggactccatctgcaagaagtacgacaagtac
gacgtcgagaggctcaacggcgccaacgtcgccggcgaggaccccttcgcccgcctctac
ggctccatcgacgccgacatcaacgaatgcgtcgagaaagcggaggcggcgaagcaggag
aagaaccgcgccacggtggtcgcgctcaacgcggagatccggcgaaccaaggccaagctc
gtcgaggaggacctgcccaagctgcagcgcctcgcgctgaagaaggtcaaagggctcaca
aaagaggaactcgcgacccgtagtgatctggttgctgccttacccgatagaatacaatca
ataccagatggtagttcaagtgcaaagaaaaatgggacttggggcgcctcaggatcccgt
actggtggagccattaagtttgacacttctgatggcaactttgatgatgagtactttaag
ggaacagaagaatcaaatcagtttcgtcgggaatatgagatgcgcaaaatgaaacaggat
gaaggtttggatattatcggtgaagggctggaaactctgaaaaacatggcatctgatatg
aatgaggaactggataggcaagttcccttgatggatgaaatggacgagaaggtggataga
gccaacacagatttgaagaataccaacgtcagactaaaagagaccgttcttcagctgaga
tctagtcgcaacttctgcattgatatcgtcctgctctgtgttattcttggtattgcggct
tatctttacaatgttctaaaaaaagtgagaccggactgtgccatggatctattttccacg
tcttccggtgatggatggatgagtttcgacgtgtccacgagctgttccctttatttttat
ctcatctgtgtaatagtagtatggtgttcttccgggacttgcgaacatccttgttga
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