Oryza sativa japonica (Japanese rice) (RAPDB): Os05g0559900
Help
Entry
Os05g0559900 CDS
T02163
Name
(GenBank) contains InterPro domain(s): IPR010978, IPR010989
KO
K20286
TATA element modulatory factor
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dosa04131
]
Os05g0559900
Membrane trafficking [BR:
dosa04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
Os05g0559900
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TMF_TATA_bd
TMF_DNA_bd
DUF7491
Seryl_tRNA_N
Motif
Other DBs
NCBI-ProteinID:
BAF18217
RAP-DB:
Os05g0559900
UniProt:
Q688Z1
LinkDB
All DBs
Position
5
Genome browser
AA seq
1032 aa
AA seq
DB search
MAWWSGKVSLGGLQDIAGAVNKISESVKNIEKNFDSALGLEEKRDDEEGSGSHASNSDRI
GFFNPVMAFMGNNGEEDSAEASEKQQPPKSTTAEQSQSASTEAPTSKVDASEESESTQSP
KPSEQGETLISSTEPPVSKAEVSEQLATPKTPKSLSATEEKPSHSTESPTYKGDSEAPQS
PTDPSTAEENSGSTETGNTIETGNQDHQETKYSGPNDEAPQSQIGESDRGIPDGTKPSSP
TELDQSGNTGTTEYLHAGTENIDDKNAIQSQPLDSILASSDDVNEAVKIVKGADDRNEIS
SSHENTDTVDQASHVEVIEHDEHTNAAENDEEANRTEAQVATVVEREENTMVQLEDLSSM
SIIVSNDSNSQNESVPTSADVPVGLVEVGSNSNDLRKEENIQGSVTTSNHLESVGAVAEL
EKLRREMKMMEAALQGAARQSQSKADEIARLMNENEQLKSTIDDLKSKSAEAEMDALKDE
YHQRVATLERKVYALTKERDTLRREQNKKSDAAALLKEKDEIISQVMAEGEELSKKQAAQ
EATMRKLRAQVRELEEEKQRLNSKIQVEETKVESIKRDKAATEKLLQETIERNQTELAAQ
KEFYTNALNAAKEAEALAEARVNTEAKVELESRLREACEKENILIKTIEELRHALTRQEQ
EAAFREERLKRDYDDLQRRYQSSELRYNELVTQVPESTRPLLRQIEAMQETAARRAEAWA
GVERTLNSRLQEAEAKAAAAEEKERSVNERLSQSSSRITVLETQITILRTEQTQLSRSLE
KERQRASESRQEYLAIKEEAAMQEGRAKQLEEEIKELRTRHKKELQDAAEHRELLEKDLE
REKAARAELEKTSSRDAPKIPLPDQTRNAPLRKLSSSGSINSLEESHFLQASLDLSDNAS
LERRMSAESNMSYYLRSMTPSAFESALRQKDGELASYTSRLASLESIRNSLAEELVKMTE
QCEKLRTEASALPGLRAELEALKQRHFQALELMGERDEELEELRNDIVDLKEMYREQVDL
LVSQLQSLGARV
NT seq
3099 nt
NT seq
+upstream
nt +downstream
nt
atggcgtggtggtcggggaaggtgtcgctcggtggcctgcaggatatcgcaggggccgtg
aataagatcagcgagagcgtgaagaacatcgagaagaacttcgacagcgcgctcgggctc
gaggagaagcgcgacgatgaggaaggatcaggatcacatgcatctaactctgatagaata
gggttctttaatcctgtcatggcattcatgggaaataatggcgaggaggattctgctgaa
gcatcagaaaagcagcaacctccaaaaagtacaaccgcagaacagagccaaagtgcctcc
acagaggcgcctacatccaaggtagatgcttctgaagaatcggaatcaacacaatctcca
aagccttctgaacaaggagagactcttatcagctcaactgagccacctgtatccaaggct
gaggtttctgagcaactagcaacaccaaaaactccaaaatcactttcagcaacagaagaa
aagcctagtcattctactgaatcacccacatataaaggggattcagaagcaccacaatct
cccacagatccatcaacagcagaagaaaacagtggatccactgagacgggtaatacaatt
gagacgggaaaccaggatcatcaagagacaaaatattctggtcctaatgatgaagcgcca
caaagtcagattggagaatctgacagaggcatacctgatggtacaaagccttcttcacct
actgaattagatcaatcaggtaacacgggaacaactgaataccttcatgctggaacggaa
aacatagatgataaaaatgccatacaatcacaaccactagattccattctagccagttca
gatgatgtaaatgaagctgtgaaaattgttaaaggagctgatgatcgaaatgaaataagc
agttcacatgagaatactgacaccgttgaccaagctagtcatgtggaagtcatagaacat
gatgagcatactaatgctgctgaaaatgatgaagaagctaatcgaacagaagcacaggta
gcaactgttgttgaaagggaggagaatacaatggtgcagcttgaagaccttagctcaatg
tccataattgtgagcaatgattcaaactcgcaaaatgagtcggtgcccacttctgcagat
gtgcctgttggactggtagaggttggttccaattcaaatgatttgagaaaagaagaaaat
atccagggctctgttacaactagcaatcatctggaatctgtcggtgctgtcgctgaactt
gagaaattaagacgtgaaatgaagatgatggaagctgcattgcaaggtgctgcaagacaa
tcccagtccaaagctgatgaaattgcaagactgatgaatgagaatgaacaactgaaatca
acaattgatgatcttaagagcaagtcagctgaagccgaaatggatgcacttaaagatgaa
tatcaccagagagtagcaactcttgaaaggaaggtgtatgccttgaccaaagaacgggat
acattaaggagagagcaaaataaaaaaagtgatgcagctgctcttttgaaagaaaaggat
gaaattatcagtcaggtcatggcggaaggtgaagagctatcaaaaaaacaagctgctcaa
gaagctactatgcggaaacttagggcacaggttcgtgaacttgaagaagaaaaacaacgg
ctgaactcaaagatccaggttgaggagacaaaggttgagagtattaaaagagataaggct
gcaacggagaaattgctacaggaaacaatagaaagaaatcaaactgaacttgcagctcag
aaggagttctacaccaatgctcttaacgcagctaaagaggctgaggcattagccgaagca
agagtcaacactgaagccaaagttgaacttgagagtcgtttaagagaagcttgtgaaaaa
gaaaatatcttaattaagacgattgaggagttgaggcatgctctcacaaggcaagaacag
gaggctgcattcagggaagaaaggctgaaaagggattatgatgatcttcaaaggcggtat
caatccagtgaacttcgttacaatgaactggtcacacaagttcctgaatccaccagacca
cttctaaggcaaattgaagccatgcaggaaacagctgctcgaagggcagaggcttgggct
ggtgtagagagaaccttaaactctcgacttcaggaagcagaagcaaaagctgctgctgca
gaagaaaaggaacggtctgtaaatgaacgtttgtctcaaagctcatcccggataactgtt
ctagagacccagattacaattcttagaacagagcagacacagctgagtcgatctcttgaa
aaagagaggcagagagcatccgaaagtagacaggagtacctggcaattaaggaggaggcg
gcaatgcaagaaggacgggcgaaacagcttgaagaagaaataaaggagcttcgtactagg
cacaaaaaggagctgcaagatgcagcagaacacagggagctgcttgagaaggaccttgaa
agagaaaaggctgccagggcagagcttgagaaaacatcttcccgtgatgcaccaaaaatt
ccgcttccagatcagacaagaaatgctcctctcagaaagctctctagttctggcagtatc
aatagtctggaagaaagccatttccttcaagcatcattagatttgtcagacaacgcttca
ttagagaggagaatgtctgctgaaagtaatatgtcgtattatcttcggagcatgactcca
agtgcttttgaatcagcactccgtcagaaagatggagagctagcttcttacacatcgcgt
ttggcctcattagaatctattcggaattctctggcagaggagttggtgaaaatgactgaa
cagtgtgagaagttgcgtaccgaggcttctgctctgcctggtttaagggctgagctggaa
gctttgaaacaaagacactttcaagctctagaactaatgggggaacgtgatgaagagttg
gaagagctaagaaatgacattgttgacctaaaagagatgtacagagaacaagtggatctt
cttgttagccagctccaatctttgggtgctcgtgtatag
DBGET
integrated database retrieval system
