KEGG   Oryza sativa japonica (Japanese rice) (RAPDB): Os05g0564200
Entry
Os05g0564200      CDS       T02163                                 
Name
(GenBank) U2 snRNP auxiliary factor, small subunit
  KO
K12836  splicing factor U2AF 35 kDa subunit
Organism
dosa  Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:dosa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    Os05g0564200
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:dosa03041]
    Os05g0564200
Spliceosome [BR:dosa03041]
 Complex A
  U2 snRNP components
   U2 related factors
    Os05g0564200
 Complex B
    Os05g0564200
SSDB
Motif
Pfam: zf-CCCH RRM_1 zf_CCCH_4 Torus zf-CCCH_4 HATPase_c Keratin_2_head
Other DBs
NCBI-ProteinID: BAF18245
RAP-DB: Os05g0564200
UniProt: Q6AUG0
LinkDB
Position
5
AA seq 304 aa
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTVSPTIVLANMYQRPDMITP
GVDAQGQPIDPEKMQEHFEDFYEDIYEELSKFGEVETLNVCDNLADHMIGNVYVQFREEE
QAVAAHNALQGRFYSGRPIIVEYSPVTDFREATCRQFEENSCNRGGYCNFMHVKQIGREL
RRKLYGGRSRRSHGRSRSPSPRHRRGNRDRDDFRRERDGYRGGGDGYRGGGGGGGGDGYR
GGDSYRGGGGGGRRGGGSRYDRYDDGGRRRHGSPPRRARSPVRESSEERRAKIEQWNRER
EEKP
NT seq 915 nt   +upstreamnt  +downstreamnt
atggcggagcatttggcttcaatatttgggactgagaaggatagggttaactgccccttt
tacttcaagattggggcttgccgtcatggggatcgttgctcccgtctgcacaacaggcca
actgtgtcgccgacaattgtgcttgctaacatgtatcagcgccctgatatgatcacacca
ggagtcgatgctcaaggccaacctattgatcctgaaaagatgcaggagcactttgaggat
ttctatgaggatatctatgaggagctgagcaagtttggtgaggttgagaccctcaatgtc
tgtgataaccttgctgaccacatgataggcaatgtgtatgtccagttcagggaggaagaa
caggcagtcgctgcgcataatgcccttcaaggtcgcttctactcagggcgcccaataatt
gttgagtattcccctgtgactgatttccgtgaggcgacctgtaggcagtttgaggagaac
agctgcaaccgtgggggctactgtaattttatgcatgtaaagcagattggcagggagctc
aggaggaagctttatggggggcgatccaggaggagccatgggagaagccgcagcccaagc
ccacgccacaggaggggcaatcgtgaccgtgatgatttccgccgtgaacgtgatggttat
cgtggtggtggtgatggttaccgtggcggcggcggtggcggtggtggtgacggttaccgc
ggcggtgatagttaccgtggtggtggtggtggtggacgcaggggtgggggcagcaggtat
gacaggtatgatgatggaggaaggcgcaggcatggcagccccccaaggcgtgcaaggagc
ccagtcagggaaagcagcgaggaacgcagggcgaagattgaacagtggaaccgtgaacgg
gaggaaaagccttga

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