Oryza sativa japonica (Japanese rice) (RAPDB): Os05g0564400
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Entry
Os05g0564400 CDS
T02163
Name
(GenBank) Similar to GTP-binding protein
KO
K07904
Ras-related protein Rab-11A
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
Os05g0564400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dosa04131
]
Os05g0564400
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dosa04147
]
Os05g0564400
04031 GTP-binding proteins [BR:
dosa04031
]
Os05g0564400
Membrane trafficking [BR:
dosa04131
]
Protein recycling
Rab GTPases and associated proteins
Rab GTPases
Os05g0564400
Exosome [BR:
dosa04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
Os05g0564400
Exosomal proteins of colorectal cancer cells
Os05g0564400
GTP-binding proteins [BR:
dosa04031
]
Small (monomeric) G-proteins
Rab Family
Rab11/25 [OT]
Os05g0564400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
MMR_HSR1
GTP_EFTU
RsgA_GTPase
Gtr1_RagA
AAA_22
ABC_tran
AAA_16
DLIC
AAA_24
TniB
AAA_18
PduV-EutP
DUF3234
FAD-SLDH
AAA_21
Motif
Other DBs
NCBI-ProteinID:
BAF18247
RAP-DB:
Os05g0564400
UniProt:
Q0DFX6
LinkDB
All DBs
Position
5
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AA seq
217 aa
AA seq
DB search
MAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKV
VKAQIWDTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWMRELKDHTDANIVI
MLVGNKADLRHLRAVSTEDAKAFAEKENTFFMETSALESMNVENAFTEVLTQIYHVVSKK
ALDIGDDPAAPPKGQTINVGGKDDVSAVKKSACCSSA
NT seq
654 nt
NT seq
+upstream
nt +downstream
nt
atggcgtaccgggcggacgacgactacgactacctcttcaaggtggtgctcatcggggac
tccggggtcgggaagtcgaacctgctgtcccgcttcacgcgcaacgagttcagcctcgag
tccaagtccaccatcggcgtcgagttcgccacccgcagcatccacgtcgacgacaaggtc
gtcaaggcccagatctgggacaccgccgggcaagaaagatatcgagctattacaagcgca
tactatcgcggagcagtaggggcactcgttgtctatgatgtcacgcgacatgtcaccttt
gagaatgtggagaggtggatgagggagctcaaggatcacacggacgccaacatcgtgatc
atgcttgtggggaacaaggcagatttgcgccaccttagggctgtctcgactgaggatgcg
aaagcatttgctgagaaagagaacactttcttcatggagacgtcggccctggagtcaatg
aatgtggagaatgccttcactgaagtgctcacccagatatatcatgtagtgagcaagaag
gctcttgacatcggcgatgacccagctgcaccaccaaaggggcagaccatcaatgttggt
ggcaaagatgatgtctctgcagtgaaaaagtctgcttgttgttcatcagcgtag
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