Oryza sativa japonica (Japanese rice) (RAPDB): Os05g0579100
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Entry
Os05g0579100 CDS
T02163
Name
(GenBank) DNA glycosylase family protein
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Os05g0579100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dosa03400
]
Os05g0579100
Enzymes [BR:
dosa01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
Os05g0579100
DNA repair and recombination proteins [BR:
dosa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Os05g0579100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
BAF18331
RAP-DB:
Os05g0579100
UniProt:
Q688U5
LinkDB
All DBs
Position
5
Genome browser
AA seq
323 aa
AA seq
DB search
MGDQSPLSPNLHPLSPSPSAAAAAAATPTPAAAAASSRSSRSKKPPHSSDPNQSKKPRLT
LTVPGRPLSADGEVAAAIQHLRAADPALATVIDAHDPPAFQCPHRPFHSLVRSILYQQLA
FKAAASVYSRFLSLLGGEHNVLPEAVLALTTQDLRQIGVSPRKASYLHDLARKYASGILS
DAAVVNMDDRSLAAMLTMVKGIGAWSVHMFMIFSLNRPDVLPAADLGVRKGVQHLYGLDA
VPRPSQMEKLCEQWRPYRSVGAWYMWRLIESKAPPPPPAIPVGPPALTEHGDELMLQQQQ
HQQQQQQSVIQMIDPLQMLPGMG
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgggcgaccaatcccccctctcccccaacctccaccccctctccccgtcgccctccgcc
gccgccgccgccgccgccactcctacccccgcagccgccgccgcctcctcccgctcgtcg
cgctccaagaagccgccgcactcctccgaccccaaccaatccaagaagccccggctgacg
ctgaccgtccccggccgccccctctccgccgacggcgaggtggccgcggccatccagcac
ctgcgcgccgccgacccggccctcgccaccgtcatcgacgcccacgaccccccggccttc
cagtgcccgcaccgccccttccactccctcgtccgatccatcctctaccagcagctcgcc
ttcaaggccgccgcctccgtctactcccgcttcctctccctcctcggcggcgagcacaac
gtcctccccgaggccgtcctcgccctcaccacccaggacctccgccagatcggggtctcc
cctcgcaaggcctcctacctccacgacctcgcccgcaagtatgcctccgggatcctctcc
gacgccgccgtcgtcaacatggacgaccgctccctcgccgccatgctcaccatggtcaag
ggcattggcgcatggagcgtccacatgttcatgatcttctccctcaatcgccccgacgtg
ctccccgccgccgaccttggggtgcgcaagggcgtgcagcatctctacggtctcgacgcc
gtgccccggccgtcgcagatggagaagctatgcgagcaatggcgcccttaccgctctgtt
ggggcatggtacatgtggcggctcatcgaatccaaggcgccgccgccgccgccggccatc
cctgtcgggccgcctgcactgactgaacatggcgatgagctcatgctccagcagcagcag
catcagcaacagcagcaacagagtgtcatccaaatgattgatcctcttcagatgctccca
gggatgggttga
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