Oryza sativa japonica (Japanese rice) (RAPDB): Os05g0589200
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Entry
Os05g0589200 CDS
T02163
Name
(GenBank) Sigma-70 region 2 domain containing protein
KO
K03093
RNA polymerase sigma-I factor
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dosa03021
]
Os05g0589200
Transcription machinery [BR:
dosa03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Os05g0589200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Motif
Other DBs
NCBI-ProteinID:
BAF18394
RAP-DB:
Os05g0589200
UniProt:
A0A0N7KLC2
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Position
5
Genome browser
AA seq
464 aa
AA seq
DB search
MGLQMMRGRPCAPCCSSSSSSSSSSSSSWMPSKHPHAPLSRRKISSESLRALALHLLPKR
RKYQNGDISRISASSSGVLEITENKSNNKADAERKILDDALDRKPQIDWVEEDISSWMDK
SYTSSNLEYNLLMQNIQVLESSLAGKDLVRLERDILVHIERLGALKSFNASISRATLTQT
YELEFSLPGDIIKLDPEIPLEEQNDVVIVRSGKSQERKLKRMKASEKGSRVSVKTPSRKS
KKSSSSQFIAEWKNYPGRRRSIVREQSALLVTIKECANLEKIRENLLKDGSEVSHASWAK
AAGIDEALLRSRLQEGYCCRERLLVTTEWLVKYIAKTYAGMGTAFEDLLQAGKMGVLNGA
EKFDSQKGCKFSTYVKYWIRKAMLALLAENSGVIQLPARMEGIIRKVREARRAIRYNTGR
NPPDAEIAALIGVSVANVRLARKCSRRVVSLYTEIGVGQNAKFV
NT seq
1393 nt
NT seq
+upstream
nt +downstream
nt
atgggtttgcagatgatgcgtggtaggccctgcgccccgtgctgttcgtcctcctcctcc
tcctcctcctcttcctcctcgtcctggatgccctccaagcatcctcacgcgccattgagt
cgaaggaaaatctcatctgagtcacttagagcattggccttgcacctcttgcccaaacgt
cggaaataccaaaatggggatatctcaaggatttcagcatcttcgtccggtgtgcttgaa
atcaccgagaacaagtccaataacaaggctgatgcagaaagaaagatccttgatgatgct
cttgacagaaagccgcagattgactgggttgaagaagatatctcttcttggatggataag
agttacacaagcagcaatttggagtataacttattaatgcaaaacattcaggtcttagaa
agtagtttggctggtaaagacttggtaaggctggaaagagatatccttgtacatatcgaa
cggctgggagcattgaaatcattcaacgcgtctatctccagggccactctaacacaaaca
tatgaattagagttttcacttcctggggatattattaagcttgatccagagattcctctc
gaggagcaaaatgatgtggtaattgttcgaagtgggaaaagtcaagagaggaaactgaaa
agaatgaaagcatcagaaaagggctctcgggtctccgtgaaaacaccctcacgaaaatca
aagaagtccagtagtagtcaatttatagctgagtggaaaaactatccaggccgaagaagg
agcattgtacgagaacaatcagcattgctggttactatcaaggagtgtgcaaaccttgag
aaaataagagaaaacttgttgaaggatgggagtgaagtcagccatgcaagctgggccaag
gcagctggaattgatgaagcattgttgaggagtaggctgcaagaaggttactgctgccga
gagagattactggtaaccaccgagtggctagtcaagtacattgcaaagacatacgctgga
atgggaacagcttttgaggatctactgcaggctgggaaaatgggtgtccttaatggagct
gagaaattcgacagccaaaaaggatgcaagttctcaacttatgtgaagtactggataagg
aaagcaatgttagcacttcttgctgaaaactctggagtaatccagctgcccgcaaggatg
gagggtataattcgtaaggtcagggaagcgagaagggcgattcgctacaacacagggagg
aacccaccagatgcagaaatcgcagccctcatcggtgtatcagttgccaatgttaggttg
gcacggaaatgctctcgtcgagttgtgtcgctttacacagagatcggagttggacagaat
gcaaaatttgtgg
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