Oryza sativa japonica (Japanese rice) (RAPDB): Os05t0223000-01
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Entry
Os05t0223000-01 CDS
T02163
Symbol
Os05g0223000
Name
(RAP-DB) Similar to TCH2 (TOUCH 2); calcium ion binding.
KO
K13448
calcium-binding protein CML
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
Os05t0223000-01 (Os05g0223000)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EF-hand_1
EF-hand_7
EF-hand_6
EF-hand_5
EF-hand_8
EF-hand_9
AIF-1
Dockerin_1
EF-hand_4
SPARC_Ca_bdg
T2SSK
GPHH
MTIP_N
HTH_12
Motif
Other DBs
RAP-DB:
Os05t0223000-01
LinkDB
All DBs
Position
chr05:complement(7533982..7534551)
AA seq
189 aa
AA seq
DB search
MASGRGGGGGVASPTPAKVEGGGGGGGGGPGMPMAELEQVFRRYDANGDGKISAEELASV
LRALGAPLGPGEVRRMMDEMDSDRDGFVDLSEFAAFHCGPTPAHGGKGGDAKDQEAASEA
ELREAFRMYDADSNGKISARELHRVLRQLGDKCSVADCSRMIRSVDADGDGCVNFDEFKK
MMGGGGGRR
NT seq
570 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcgggcgaggaggagggggtggggtggcgtcgccgacgccggcgaaggtggag
ggcggcggaggaggaggaggaggggggccggggatgccgatggcggagctggagcaggtg
ttccggcggtacgacgcgaacggcgacgggaagatctcggcggaggagctggcgtccgtg
ctgcgggcactgggggcgcccctcggtcccggcgaggtgcggcgcatgatggacgagatg
gactccgaccgcgacggcttcgtcgacctctccgagttcgccgccttccactgcggcccc
acgccggcgcacggcggcaagggcggcgacgccaaggaccaggaggccgcgtcggaggcg
gagctgagggaggcgttccggatgtacgacgccgacagcaacgggaagatctcggcgcgg
gagctccaccgcgtgctccgccagctcggcgacaagtgctccgtcgccgactgctcccgg
atgatccggtccgtcgacgccgacggcgatggctgcgtcaacttcgacgagttcaagaag
atgatgggcggcggcggcggccggcggtag
DBGET
integrated database retrieval system
