Oryza sativa japonica (Japanese rice) (RAPDB): Os05t0312600-01
Help
Entry
Os05t0312600-01 CDS
T02163
Symbol
Os05g0312600
Name
(RAP-DB) EF-Hand type domain containing protein.
KO
K13448
calcium-binding protein CML
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
Os05t0312600-01 (Os05g0312600)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EF-hand_1
EF-hand_6
EF-hand_5
EF-hand_7
EF-hand_8
Caleosin
EF-hand_9
EF-hand_4
SPARC_Ca_bdg
AIF-1
EFhand_Ca_insen
Motif
Other DBs
RAP-DB:
Os05t0312600-01
LinkDB
All DBs
Position
chr05:complement(14360902..14361495)
AA seq
197 aa
AA seq
DB search
MLRPPPPSSVLTASAAAARPPASVVQPQRQAAHRRRAETLRLRRVFEMFDRDGDGVITPA
ELSGALCRLGARGEAPPAAAALDAVVAAYIAPGMAGLRFAEFEALHAELAGLGGRQAVAA
AEAEEEKEADMREAFGVFDEDGDGYISAAELQAVLSRMGLPEAACMARVRDMIAAADRDS
DGRVDYEEFKAMMAAGN
NT seq
594 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgtcctccgccgccctcgtccgttctcacggccagcgccgcagcagctcggccg
ccggcgtcggtagtgcagccacagcggcaggcggcccaccggcggagggcggagacgctg
cggctgcggcgcgtgttcgagatgttcgaccgcgacggcgacggcgtgatcacgccggcc
gagctgtcgggcgcgctgtgccggctcggcgcgcgcggggaggcgccgcccgcggccgcc
gcgctcgacgcggtcgtcgcggcgtacattgccccggggatggcggggctccgcttcgcc
gaattcgaggcgctccacgccgagcttgccggcctgggtggtcgtcaggcggtggcggcg
gcggaggcggaggaggagaaggaggcggacatgagggaggcgttcggggtgttcgacgag
gacggcgacgggtacatctccgcggcggagctgcaggccgtgctgtcgcggatggggctc
ccggaggccgcgtgcatggcgcgggtgcgcgacatgatcgccgccgccgaccgggacagc
gacggccgtgtcgactacgaggaattcaaggccatgatggccgctggtaattaa
DBGET
integrated database retrieval system
