Oryza sativa japonica (Japanese rice) (RAPDB): Os06g0116300
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Entry
Os06g0116300 CDS
T02163
Name
(GenBank) contains InterPro domain(s): IPR006011, IPR010989
KO
K08489
syntaxin 16
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
Os06g0116300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dosa04131
]
Os06g0116300
Membrane trafficking [BR:
dosa04131
]
SNARE
Syntaxin (Qa)
Stx-TGN / EE
Os06g0116300
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HEF_HK
K_channel_TID
Syntaxin_2
Motif
Other DBs
NCBI-ProteinID:
BAF18533
RAP-DB:
Os06g0116300
LinkDB
All DBs
Position
6
Genome browser
AA seq
183 aa
AA seq
DB search
MATRNRTPLYRKYRDALRHVRAPAGAPSSSSSGGGGGGGGGGPVIEMASLLRSNRPYAPL
STDDPSAASSRSAVTVGLPPAWVDVSEEISANMQRARTKMAELAKAHAKALMPSFGDGRD
DQRAIEILTHEVTDLLKRSEKRLQKLSMKDSSEDSNVRKNVQVMMGSYLYLLNSYRTHKG
FLF
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgcggaaccggacgcctctgtaccgcaagtaccgcgacgcgctgcgccacgtc
cgcgcgccggcgggggctccgtcgtcgtcatcgtccggaggaggaggaggaggaggaggc
ggggggccggtgatcgagatggcctcgctgctgcgctccaaccgcccctacgcccccctc
agcaccgacgacccctccgccgcctccagtagaagtgctgtgacggtcgggctgcccccg
gcatgggttgatgtttccgaagagatatctgccaacatgcagcgggcaagaacgaagatg
gcagagctggctaaggcacatgccaaagccttgatgccatcctttggtgatggtagagat
gaccagcgagcaattgagattcttacacatgaggtaacagacttactgaagaggtcggag
aagagacttcagaagctatccatgaaagattcttcagaggattcaaatgtccgaaagaat
gtccaggtgatgatgggctcctatctttacttattaaacagctacaggactcataaggga
tttttgttttga
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