Oryza sativa japonica (Japanese rice) (RAPDB): Os06g0171800
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Entry
Os06g0171800 CDS
T02163
Name
(GenBank) Zinc finger, Rad18-type putative domain containing protein
KO
K15363
fanconi-associated nuclease 1 [EC:3.1.21.-
3.1.4.1
]
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
Os06g0171800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dosa03400
]
Os06g0171800
Enzymes [BR:
dosa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.1 phosphodiesterase I
Os06g0171800
DNA repair and recombination proteins [BR:
dosa03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
Other FA pathway factors
Os06g0171800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VRR_NUC
HIRAN
FAN1_HTH
FAN1_TPR
TPR_7
Sgf11
Fan1_SAP
Motif
Other DBs
NCBI-ProteinID:
BAF18851
RAP-DB:
Os06g0171800
UniProt:
Q5SNL7
LinkDB
All DBs
Position
6
Genome browser
AA seq
964 aa
AA seq
DB search
MLTGRESLVRLIGRRRRSPLPAALALAVPPSRSLQDDAADAEREAAAGGSSSGGGDAAGA
AGWVACPVCGESIRGTDYCVNTHLDICLTRGTKRKLTQSTLLDFSFSRKATDDYALNNLN
TSDEAEHMEPTDGNVSSDGAFFSLNNDKVNSKGSANASSPGCLHGSPDISETCDTCLPPN
VLLPYTENTANNGVVKKCLSHMPSTDATSSTIGLLSVTDSSNSVVVDTVIVGRRFHENIE
LQEGASITLLRDPQNAKDPDAIKVLYAGYECEQMLGYLPRELAKVLAPLLDRHYIECEGC
VVGVPEQQLDHVPIQLKCQKYTDENETYDDLKHPQFLWENFICAVGNGNLLQPSSTRYQT
NFSSMITDVMANHSHLFSDKEKSFLDSFQLLPDDGQRLFVRIYTRKGPWFRMSSISYREI
SDLGQAAMELKLAGYIDMISCMDDLSNYDLKEVIDVLSVPEMKEILKELQKNNVSCTRRH
ELLSTLLYLYRNGTCTILPKRILKWTGTCIRTSDVADELLWRVQRLFFLNGDQDLSFFLL
VDLGLVRFPVYACTISHRVFQEISDLLQYEEAIQVAQVMDQSLDNSNMEMVTRCIELSEN
RLSTAPKEENATRAEPPPSFFSRFSASSVYSKILTLGVSVYERDRRYTDAIRVLKRLLST
VASDRKRGYWALRLSVDLEHMNRSNESLSIAEAGVIDPWVRAGSKIALQRRVVRLSKPPR
RWKVPSYANAVTTNIKEVNIEGRPLNCETGAKNVFYGYDGELCGVEQLALQYYADEGGGW
RGTHSEGGIWMTIFGLLMWDAIFSDVPDVFQTKFQTAPLDLETDEFYRSRKDLIESQLKK
IQDGIAEEILISSWELHQGTSCRGVNWDRHSLTDLRAAVVCTGGHRLASLLRHLALDYRS
WSSGMPDLLLWRFLDERGGGEAKLVEVKGPRDQLSEQQRAWILVLMDFGFDVEVCKVSPV
SKRR
NT seq
2895 nt
NT seq
+upstream
nt +downstream
nt
atgctgaccgggcgggagagccttgtccgcctcatcgggcggcgccgccgctcccctctc
cccgccgccctcgccctcgccgtgcccccctcccgctcccttcaggatgatgcggccgat
gcggagagggaagccgcggcgggtggttcttcgtcgggagggggcgacgccgccggcgcg
gcggggtgggtggcgtgccccgtctgcggcgagtccatccgcggcacggattactgcgtc
aacacgcacctcgatatatgccttacaagaggaacaaaacggaagttaactcagagcacc
cttcttgatttcagtttcagtagaaaagccacagatgattacgctttgaacaatttgaac
accagtgatgaggcagagcatatggaaccgaccgatggaaatgtatctagcgatggagct
ttcttctcgttgaataatgacaaggtcaattcaaagggaagtgctaatgcttcatcacct
ggctgcctgcatggctctcctgacatctcggagacatgtgatacctgtctaccacccaat
gtattattaccatatacagaaaatactgcaaacaatggtgtagtcaagaagtgcttgtcc
cacatgccttcaactgatgcaacttcgagtactattggtttgctttcagtgacagattct
agcaattcggtagtagttgacactgtcatagtgggcaggaggttccatgaaaacatagaa
ttgcaagaaggtgcgagcattactcttctccgagatcctcagaatgcaaaggaccctgac
gctatcaaggtgctttatgcaggctatgaatgtgaacagatgcttggatacttacctcga
gagctggctaaagttttggctcctctactggacagacactacattgaatgcgagggatgt
gtggttggcgtgcctgaacaacaacttgatcatgttcccatccagcttaagtgccagaaa
tatacagatgaaaatgagacatatgatgatctgaagcatccacagttcttatgggaaaat
ttcatatgtgctgttggaaatggaaatttgctgcaacctagcagtacgagataccagaca
aattttagttcgatgataacagatgtgatggcaaaccattcacacctttttagtgacaag
gaaaagtcatttttagactcttttcagttgttaccagatgatggacaaaggctctttgtt
aggatctacactcgaaaagggccatggtttcgaatgagcagtatctcatatcgtgagata
tcagatctggggcaggcagccatggaacttaagttggcaggttatattgacatgatatcc
tgcatggatgatctatctaactatgatttgaaggaggttattgacgtgctaagtgttcct
gaaatgaaagaaattctaaaagagctccaaaagaataacgtcagctgcacacgccgacat
gagcttcttagcacccttctgtatttatatcgtaatggaacctgcacaattctaccaaag
cgaattctgaagtggacaggaacatgcataagaacttctgatgtggctgatgaacttctg
tggcgtgtccagagactcttttttctaaatggtgatcaagatctctcattctttctgtta
gtggatcttggtctggtgaggtttccagtctatgcctgcaccatttctcaccgcgttttt
caggaaataagtgatctactacagtatgaagaggctattcaagtggcacaggtaatggat
caatctcttgataatagtaacatggaaatggtgacaagatgcattgagttatctgagaat
cgactaagcacagcaccaaaagaagaaaatgcaactagggctgaacctcccccatcattc
ttctcacgtttttcagcttcctcggtctattcgaagatacttacgttaggtgtatctgtt
tatgaacgagaccgtaggtatactgatgcaataagagttctaaagagactactcagtact
gttgcttcggatagaaagcgaggatattgggctttgagactatctgttgatttggagcac
atgaatcgttccaatgagagcctgtcaatagctgaagcaggggtaattgatccatgggtc
cgtgctggttcaaagattgcactgcaaaggagagttgtgcgtttaagcaaacctccacgg
cgctggaaagttcccagttatgccaatgctgttacgacaaatataaaagaggtaaatata
gaaggaagaccgttaaattgtgaaacaggtgcaaagaatgtattttacggatacgatggt
gagctttgtggggtagaacaattggctttacaatattacgcagatgaaggagggggttgg
cgaggtacccattcagaaggtggcatttggatgactatctttggccttctaatgtgggat
gcaatattttcagacgtaccagatgttttccagactaaatttcagacagcccctctggac
ctggaaactgatgaattctacagatcaagaaaggaccttatagagtcccagctgaaaaag
attcaagatggcattgctgaagagattcttatcagctcctgggagctacaccaggggaca
tcctgcaggggtgttaactgggaccggcattccttgacagatctacgagctgccgtcgta
tgcaccggtggccatcgcttggcatctctgctccggcatctagccctcgattacagaagc
tggtccagtggaatgcctgatctgctgctatggcgtttccttgatgaaagaggaggcggt
gaagctaaacttgtggaggtcaaagggccaagggaccagctgtctgagcaacagcgtgcc
tggatacttgttctcatggactttggttttgatgtggaagtttgcaaggtaagcccagtt
tctaagaggagatag
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