Oryza sativa japonica (Japanese rice) (RAPDB): Os06g0174400
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Entry
Os06g0174400 CDS
T02163
Name
(GenBank) Similar to Vesicle-associated membrane protein 712 (AtVAMP712)
KO
K08515
vesicle-associated membrane protein 7
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa04130
SNARE interactions in vesicular transport
dosa04142
Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
Os06g0174400
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
Os06g0174400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dosa04131
]
Os06g0174400
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dosa04147
]
Os06g0174400
Membrane trafficking [BR:
dosa04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
VAMP
Os06g0174400
Exosome [BR:
dosa04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
Os06g0174400
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Synaptobrevin
Longin
Sigma_reg_N
Motif
Other DBs
NCBI-ProteinID:
BAF18860
RAP-DB:
Os06g0174400
UniProt:
Q0DE63
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All DBs
Position
6
Genome browser
AA seq
221 aa
AA seq
DB search
MAILYAVVARGTVVLAEHSAAATNAGAVARQVLERLPGGGADSHVSYTQDRYVFHAKRTD
GITALCMADEAAGRRIPFAFLEDIHGRFVKTYGRAALTSLAYGMNDEFSRVLSQQMDYYS
NDPNADRINRMRGEISQVRTVMIDNIDKVLERGDRLDMLVDKTANMQGNTIRFKRQARRF
RNTTWWRNVKLTIALIFLLTVIIYVVLVFMCHGFTLPTCIR
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atggcgatcctgtacgcggtggtggcgcgcgggacggtggtgctggcggagcacagcgcg
gcggcgaccaacgcgggcgccgtggcgcggcaggtcctcgagcgcctccccggcggggga
gccgacagccacgtctcctacacgcaggaccgctacgtcttccacgccaagcgcaccgac
ggcatcaccgcgctctgcatggccgacgaggccgccggacggcgaatcccctttgcgttc
cttgaggatatccatggaaggttcgtgaagacatatggccgtgctgcattgacatccctt
gcttatggcatgaatgatgagttctcgagggtcttgagtcagcaaatggattactattcg
aatgacccaaacgcagacagaataaatcgtatgaggggtgaaatcagtcaggtccgtact
gttatgattgacaatattgataaagtccttgaaagaggtgatcgtttggacatgttggtc
gacaagactgcaaatatgcaaggaaatacaattcgttttaaacgacaagctcgccgcttc
agaaataccacctggtggagaaatgttaaactcacgattgcgttgatattcctcctcacg
gtaataatatacgttgtgctcgtctttatgtgccatggcttcaccttgcctacttgtatt
aggtga
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