Oryza sativa japonica (Japanese rice) (RAPDB): Os06g0179000
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Entry
Os06g0179000 CDS
T02163
Name
(GenBank) Glycoside hydrolase family 79, N-terminal protein
KO
K07964
heparanase [EC:
3.2.1.166
]
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa00531
Glycosaminoglycan degradation
dosa01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
Os06g0179000
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
dosa00536
]
Os06g0179000
Enzymes [BR:
dosa01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.166 heparanase
Os06g0179000
Glycosaminoglycan binding proteins [BR:
dosa00536
]
Heparan sulfate / Heparin
Enzymes
Os06g0179000
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_79n
Motif
Other DBs
NCBI-ProteinID:
BAF18881
RAP-DB:
Os06g0179000
UniProt:
A0A0P0WTG2
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Position
6
Genome browser
AA seq
526 aa
AA seq
DB search
MEMRRFLGGLCFLALLRLGGAAEAVVGVAGVDGRRAIAATDEDFVCATMDWWPPDKCDYG
TCSWGLASLLNLDLSNKILLNAIRGTFSPLKLRLGGSLQDKLVYGTGDGGGPCAPFVKNT
SEMFGFTQGCLPLHRWDELNAFFQKSGARIVFGLNALNGRVPLPDGSMGGPWDYTNAASL
IRYTASKGYKIHGWELGNELSGSGVGTKVGADQYAADVIALKSLVDTIYQGNPSKPLVLA
PGGFFDAGWFTEVIVKTRPNLLNVVTHHIYNLGPGVDTHLIEKILNPSYLDGMVSTFSNL
QGILKSAGTSAVAWVGESGGAYNSGRHLVTDSFVFSFWFLDQLGMSAKYDTKSYCRQSLI
GGNYGLLNKETFQPNPDYYSALLWHRLMGTKVLSATFNGTNMIRTYAHCAKDSPGITLLL
INLSGNTTSQVSVTSEGAHANTVKKHSRKTRHLAAGSMREEYHLTAKDGSLQSQVMLLNG
RALVADENGEIPRLEPVKVDAAQPIAVAPYSIVFAHIHNFPAPACS
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atggagatgaggcggtttcttggtgggctatgcttcttggctctgctgcggctgggcggc
gccgcggaggccgtggtcggggtcgccggcgttgacgggcggcgcgccattgccgccacc
gacgaggacttcgtgtgcgcgacgatggactggtggccgccggacaagtgcgactacggc
acctgcagctggggcctcgcctccctcctcaacctggatctctccaacaaaatcttgctc
aatgccattcgaggtaccttctcgccgttgaagctgcggctgggcgggtcgctgcaggac
aagctggtgtacggcaccggcgacggcggagggccgtgcgcgccgttcgtcaagaacacg
tcggagatgttcggcttcacgcagggatgcctgcctctccaccggtgggacgagctcaac
gccttcttccaaaaatccggcgcgagaatcgtgttcgggctgaacgctctcaacggccgg
gttccgttgccggatgggtcgatgggagggccatgggattacaccaatgctgcatcgctg
attcgttacaccgcgagcaagggttacaaaattcatggatgggagcttggaaatgaactc
agtggcagtggagttggaacaaaagttggggctgaccaatatgctgcagatgtgattgca
ctgaaatcactagttgacactatctaccaaggcaatccatcaaagccacttgttcttgct
cctggaggtttctttgatgcaggctggtttactgaagttatagtcaaaaccaggccaaac
ctactgaatgtggtcacccatcacatctacaacttagggccaggagtggacacacatctg
attgagaagatcctgaatccatcttatcttgatggaatggtgagcacattcagcaatctt
caggggatactgaaatctgccgggacttcggctgtcgcatgggtcggagagtccggaggc
gcgtacaacagcggccgccatcttgttaccgattcatttgtgttcagtttctggtttttg
gatcagcttgggatgtcagcaaagtatgacacgaagagttactgcagacaaagtttgatt
ggtggcaactatggcctgctaaacaaagaaacattccaaccaaatcctgactattacagc
gctctactatggcatcgcctcatgggaaccaaagttctatctgcaacattcaatggcacc
aacatgattcgcacttatgcgcattgcgcaaaagattctccaggaataacactactgctg
atcaacctcagtggcaacaccacaagccaagtttcagtgacaagtgaaggtgctcatgca
aacactgtgaagaagcatagcagaaagaccaggcatcttgcagctggatcaatgagagaa
gaataccatcttactgccaaagatggcagcttgcagagccaagtgatgctgctgaatggc
agggcattggttgctgatgaaaatggggaaatccctaggctggagcctgtcaaagtggat
gcagcacagccaatagctgtggctccttactccattgtgtttgctcacatacacaatttc
cctgcccctgcatgtagttag
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