Oryza sativa japonica (Japanese rice) (RAPDB): Os06g0319600
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Entry
Os06g0319600 CDS
T02163
Name
(GenBank) Poly(A) polymerase, central region domain containing protein
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
Os06g0319600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dosa03019
]
Os06g0319600
Enzymes [BR:
dosa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
Os06g0319600
Messenger RNA biogenesis [BR:
dosa03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
Os06g0319600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
MTPAP-like_central
Nrap_D2
Motif
Other DBs
NCBI-ProteinID:
BAF19421
RAP-DB:
Os06g0319600
UniProt:
Q0DCK2
LinkDB
All DBs
Position
6
Genome browser
AA seq
769 aa
AA seq
DB search
ISELASKRQQNSCGAYCRPVSMAKSNNGNGYLGVTEPISLSGPTEKDVVRTQEVEKCLAD
AGLYESQEEAVSREEVLGKLDQIVKAWIKKATRASGFGDQFVQEANAKIFTFGSYRLGVH
GPGADIDTLCVGPRHATRTEYFFQALYDMLVDMPEVTELHPVPDAHVPVLKFKLNGVSID
LLYANLTHVVIPEDLDLSHDSILHNVDEQTVRSLNGCRVTDKILRLVPNILTFRTTLRFM
RFWAKRRGVYSNVIGFLGGINWALLVARICQLYPNASPSMLISRFFKVYSKWKWPNPVML
CHIEEGSLGLLVWDPRRNFRDRGHHMPIITPAYPSMNSSYNVSISTRHVMVQEFTRASDI
CQAIDERKADWDALFEPYPFFESYRNYLKIEITARNEDDLRNWKGWVESRLRTLVLKIER
FTREMLLSHPNPRDFIDSSRPLHCFYFMGLWKKQISQAQEAEQYDIRAIVNEFKSNIHAY
QHWREGMEIEVSHVKRKDIPSFVFPGGIRPSRPSRTVGKEARAVSRSNISANVQERNVPS
MAQPMPYKSSEVNKIPSDPHGGYQSQERNNAVVSSLPCEETGHMFNGYANLHTESVELEH
LRSYKGSTSVPENHVVHDLVKPPESMPPNSIHVYPSPTNGLGHLLDSSCKKPADIIVNKT
TNFSSAVLAVPDELDELDSHQVKVNQKDLTAVDQGLSLEHKVGSNGGKAGTTGSPDNNHL
KRKAEEELEPLELAAPLVRPPAPTSMTQRRPLRLRLSTVVQPKPAEGTS
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atttctgagctagctagtaagaggcagcagaattcctgtggggcttattgtagacctgtc
tctatggcgaagagtaacaatggtaatggctacctcggtgtgactgagccaatctcattg
agtggtccaactgagaaggatgttgtccgtacgcaggaggttgagaagtgtcttgctgac
gctggcctgtatgaaagccaagaggaagctgtctcacgagaagaggttttaggcaaactg
gaccagattgtcaaggcttggattaagaaggcaactcgagctagtggttttggcgaccaa
tttgtgcaagaagcaaacgcaaagatttttacttttggctcataccgactaggggttcat
ggccccggtgcagatattgatacgctttgtgtgggtccaaggcatgcaactcgaactgaa
tactttttccaggctctttatgatatgctagttgatatgccagaggtcacagagttacat
ccagtgccagatgctcatgttcctgttttgaaattcaaacttaatggggtttctattgat
cttttatatgctaatcttacacatgttgttattcctgaggacctggatctttcgcatgac
tctatattgcacaatgttgacgaacaaactgtccgaagtcttaatggatgccgagttact
gataaaattctacgattggttccaaatattctgactttccggacaaccttgagattcatg
agattttgggcaaaacgccgtggagtctactcaaatgttatagggtttcttggtggtata
aactgggcacttcttgttgctcgtatatgtcaactgtacccaaatgcatcaccaagcatg
ttgatatctcgttttttcaaagtctacagcaagtggaagtggcctaatcctgttatgctt
tgccatattgaagagggttctcttggtcttcttgtgtgggacccaaggagaaattttaga
gacaggggtcatcatatgcctataattacacctgcttatcctagtatgaattctagctat
aatgtatctatcagtactaggcatgtgatggtccaagaattcacacgagcttctgatatc
tgtcaggcaatagacgaaaggaaagcagactgggatgctttgtttgagccatatccattt
tttgaatcgtatagaaattatctaaagattgagatcacagcaagaaatgaagatgacctc
aggaattggaaaggttgggtagaatcccggcttcgtacgcttgtattaaagattgaacga
tttacacgtgagatgctcctctcacatcctaatcctagagatttcatcgacagctccagg
ccattgcattgtttttactttatgggtctctggaaaaaacaaatcagccaagctcaagaa
gctgagcagtatgacattagagcaattgtgaatgaatttaaaagcaatatccatgcatat
caacactggagagaaggaatggaaattgaagtttcccatgtaaaaagaaaagatatccca
tcatttgtttttcctggtggaatccgtccttctcgcccatcaagaacagttggcaaggaa
gctcgggctgtttcaagaagtaatatttcagctaatgttcaagaaagaaatgttccaagc
atggcccagcctatgccatataagagtagtgaagtaaacaaaattccgtcagatcctcat
ggtggctatcagtcgcaagaaagaaataatgcagtggtctctagtttgccctgtgaagaa
actggccatatgttcaatgggtatgcaaatctccatacagaatctgttgagctggaacac
ttgagaagctacaagggaagtacatctgttcctgagaaccatgttgtgcatgatttagtc
aagccaccagagagcatgccacctaactcaatccatgtttatccaagtccaacaaatgga
ttgggccatcttttagatagttcttgtaaaaaaccagcagacatcattgtaaataaaacc
acaaatttctcttcagctgtcctagcagtacctgatgaacttgatgagctggattctcat
caagtgaaggtaaatcagaaagatttaactgcagtagatcaaggattatctttggagcat
aaagttggaagtaatgggggcaaagcaggaaccacaggttcacctgataacaatcatctg
aagcgtaaagctgaggaagagcttgagccacttgagcttgctgccccactagttcgccct
cctgcaccaacgtccatgacccagaggaggcccttgagactgagattgtcaactgtggtg
caacccaaacctgctgaaggaacttcatga
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