Oryza sativa japonica (Japanese rice) (RAPDB): Os06g0502600
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Entry
Os06g0502600 CDS
T02163
Name
(GenBank) WD40-like domain containing protein
KO
K14791
periodic tryptophan protein 1
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dosa03009
]
Os06g0502600
Ribosome biogenesis [BR:
dosa03009
]
Eukaryotic type
90S particles
Other 90S particles
Os06g0502600
Pre-60S particles
Other pre-60S particles
Os06g0502600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40_Prp19
WD40_CDC20-Fz
WD40
EIF3I
Beta-prop_WDR19_1st
Beta-prop_TEP1_C
WD40_WDHD1_1st
WDR55
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR3_2nd
Beta-prop_TEP1_2nd
Beta-prop_EML_2
ANAPC4_WD40
WD40_RFWD3
Beta-prop_RIG_2nd
WD40_Gbeta
Beta-prop_Nup120_160
Beta-prop_Aladin
Beta-prop_EML
Beta-prop_WDR41
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR75_1st
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_1st
Beta-prop_DCAF12
Beta-prop_RIG_1st
Beta-prop_DCAF4
Motif
Other DBs
NCBI-ProteinID:
BAH93535
RAP-DB:
Os06g0502600
UniProt:
C7J3R9
LinkDB
All DBs
Position
6
Genome browser
AA seq
295 aa
AA seq
DB search
MISAICWIPRGAVKTVPLVAAPPTREEIHAAIGAAAASERRRREEIDTDDDGMDDIDGAQ
EEDEVALQSDDCSVDYIADGLRELDMENYDDEDGVIKDLCSGSSDLYYPSNDMDPYLKNK
NNGLVSILEEMEDGHPYLYPYDEIVLLGIPLCVPWSDCGLMDGQKDEKIQDWKPETLYLI
GIDWNKENILASASADKTVKIWDVAAGKCVTTLEHHDAKVKLWDISSNQPSVIASLNPKV
GAIFSISFSKDNPFLLAVGGQKGNLKLAATLEEKIKEMTLLSAETFYNEVVEWWG
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgatctcggccatctgctggatcccccggggggcggtcaagaccgtcccgctcgtcgcg
gcgccgcccacgcgagaggagatccacgcggccatcggcgccgccgccgcttcggagagg
cgccgccgtgaagaaattgatactgacgatgatggcatggacgacattgacggagctcag
gaggaggacgaggtggctctgcagagcgatgattgtagtgttgattacattgctgatggc
ctccgcgagcttgacatggagaattacgacgacgaggatggagtaattaaggatctctgc
tctgggtcaagcgacttgtactatccaagtaacgacatggatccttatcttaagaacaag
aacaatggcctggtgtcgatacttgaagaaatggaggatggacatccatatctgtaccct
tatgatgagattgttcttttgggcatcccattatgcgttccatggtcggactgtggtctt
atggacggtcagaaagatgaaaagatacaagactggaagccagagactctgtacttaatt
ggtattgattggaacaaggagaatattctagccagcgctagcgcagacaaaacagtcaaa
atttgggatgttgcagctggtaaatgtgtaacaacattagaacatcacgatgcaaaggtg
aagctctgggatatatcaagcaaccagccgtctgtcattgcttcgctgaatccgaaagtt
ggtgctattttctcaatatcattttcaaaagacaatcccttcttgttggctgtgggaggg
cagaagggcaacttgaaattagcagcaacactagaggaaaagataaaggagatgacgctc
ctgtccgcggaaacattttacaatgaagttgtcgaatggtggggatga
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