Oryza sativa japonica (Japanese rice) (RAPDB): Os06g0508700
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Entry
Os06g0508700 CDS
T02163
Name
(GenBank) Similar to Scye1-prov protein
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa00450
Selenocompound metabolism
dosa00970
Aminoacyl-tRNA biosynthesis
dosa01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
Os06g0508700
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Os06g0508700
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
dosa01007
]
Os06g0508700
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dosa03016
]
Os06g0508700
Enzymes [BR:
dosa01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
Os06g0508700
Amino acid related enzymes [BR:
dosa01007
]
Aminoacyl-tRNA synthetase
Class I (U)
Os06g0508700
Transfer RNA biogenesis [BR:
dosa03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
Os06g0508700
Prokaryotic type
Other AARSs
Os06g0508700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1g
tRNA_bind
Anticodon_3
Anticodon_1
tRNA-synt_1
CoV_peptidase
Motif
Other DBs
NCBI-ProteinID:
BAF19643
RAP-DB:
Os06g0508700
UniProt:
Q0DBY0
LinkDB
All DBs
Position
6
Genome browser
AA seq
727 aa
AA seq
DB search
MEEKCSPKEICDKYHAVHSEVYKWFDIKFDKFGRTSSPQQTEVCQAIFQKLMENNWLTEN
TMQQLYCDTCQRFLADRLVEGKCPTEGCNYEAARGDQCENCSKLLNPTELIDPKCKVCKN
TPRVRDTDHLFLELPLLSDKLVNYINETSVAGMWSQNAIQATNAWLKEGLKPRCITRDLK
WGVPVPHEKYKDKVFYVWFDAPIGYVSITASYTPDWEKWWKDPDNVELFQFMGKDNVPFH
TVMFPSTLLGTGEKWTMMKTISVTEYLNYEAGKFSKSHGIGVFGNDAKDTNIPPEVWRYY
LLTNRPEVSDTLFTWADLQAKLNSELLNNLGNFINRVLSFVAKPAGAGYDSIVPDAPNAE
SHPLTKALVEKTNKWVEQYLEAMEKVKLKQGLKSAMGISSDGNAYLQESQFWKLYKEDPA
ACAVVMKTSVGVVYLLACLLEPFMPSFSNEVLLQLNMTPEESLSFCDDKGEIAKAKRPWD
FVSAGHKIGKPSPLFKELKDEEVESFRNKFAGSQAERSSKAQADAEAKKVADKLKGTKLS
DGGQKKEQKKQSGGSKSKNAEVDVTVAKLDIRVGLIRKAQKHPDADSLYVEEIDVGEEAP
RTVVSGLVKFIPLEEMQNRKVCVLCNLKPVAMRGIKSHAMVLAASNEDHTKVELVEPPES
AAVGERVTFAGYSGEPEASLNAKSKTWEKLSADLHSNGELVACYKDVPFTTSAGVCKVKS
IASGEIR
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atggaggagaagtgctcgcccaaggagatctgcgacaagtatcatgctgtccatagtgag
gtttacaaatggtttgacataaagtttgacaagtttggacggacatcctctccccaacag
actgaagtctgccaagcaattttccaaaagttgatggaaaacaattggctcacagaaaac
accatgcagcagctgtactgtgatacttgccaacgatttttagcggataggctcgtggag
gggaaatgtccaactgaaggctgtaattatgaggcggcgcgaggtgatcagtgtgaaaac
tgcagcaaattgttgaatccaactgagctaattgatcccaagtgtaaggtctgtaagaat
actccacgtgtccgtgacacagatcacttattccttgagcttcctcttttgagcgacaag
ttggtaaactatatcaatgaaacttctgtagctggtatgtggagtcaaaatgctattcag
gcaacaaacgcatggctgaaggaaggtttgaagccacgctgtatcacccgagatctcaag
tggggtgttcctgttccacatgagaaatataaggacaaggtgttctatgtttggtttgat
gcaccgattggctatgtatctatcacagcttcctatacacctgattgggagaaatggtgg
aaggatcctgataacgtagaattgtttcagttcatgggtaaagataatgtgccatttcac
acggtcatgttcccttctacattacttggaactggcgaaaagtggacaatgatgaagacc
ataagtgtgactgaatatttgaactacgaagcaggaaaattctccaagagccatggtatt
ggagtctttggtaatgacgcgaaggatacaaatatacctcctgaagtgtggcgttactac
ttgcttacaaatcgtcctgaggtatcagatacactatttacttgggctgatttgcaagcc
aaattaaacagtgagttgttgaacaacttggggaatttcatcaaccgtgtgctcagtttt
gttgcaaaaccagcaggagccggatatgattccatcgtacctgatgctcctaacgctgag
tcgcatccactgacaaaggcacttgttgagaaaactaataaatgggttgaacaatatctt
gaagcaatggaaaaggttaaattgaaacaaggactgaagagcgctatgggcatttctagt
gatggaaatgcatatctgcaagagagccagttttggaaactttataaggaagatccagca
gcctgtgctgttgtaatgaaaacttcagttggtgtggtctatctccttgcctgtttgctg
gagcctttcatgccttcattttccaatgaagtgttgctgcaattaaatatgacccctgaa
gaaagcttgtctttctgtgacgataaaggagaaatcgccaaggcaaaaagaccttgggat
tttgtatcagcaggccacaaaataggaaagccttcacctctatttaaagaactgaaagat
gaagaagtagagtccttcaggaataaatttgcaggcagccaagctgagaggagctcaaaa
gcacaagctgatgctgaagctaagaaggttgctgacaagctcaagggcacaaaattatct
gatggaggtcaaaagaaggaacagaaaaaacaatcaggtggttcaaaatcaaagaatgca
gaggtggatgtcacggtggcaaagttggatattcgagtggggcttatcaggaaagcacag
aagcatccagatgctgattcgctgtatgtagaggagattgatgttggagaggaagcacca
agaacagttgttagcggccttgtcaaattcatccctcttgaagaaatgcagaaccggaaa
gtgtgtgttctctgcaatctgaaaccagtggcgatgcgcggtataaaatcacatgcaatg
gttctggctgcatcaaatgaggaccatacaaaggttgagctggttgagccaccagaatcc
gcagcggttggggagagggtgacctttgctgggtactctggagagcctgaggcgtctctc
aacgcaaagagcaagacgtgggagaagctatcagctgacctgcacagcaacggcgagctc
gtggcgtgctacaaggatgtacccttcacaacttcagctggagtttgcaaggtgaagtcg
atagcgagtggagaaattcgctag
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