Oryza sativa japonica (Japanese rice) (RAPDB): Os06g0520600
Help
Entry
Os06g0520600 CDS
T02163
Name
(GenBank) Similar to Zinc finger CCCH type domain containing protein ZFN-like 1
KO
K03260
translation initiation factor 4G
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dosa03019
]
Os06g0520600
03012 Translation factors [BR:
dosa03012
]
Os06g0520600
Messenger RNA biogenesis [BR:
dosa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
Os06g0520600
mRNA cycle factors
Stress granule specific factors
Os06g0520600
Translation factors [BR:
dosa03012
]
Eukaryotic type
Initiation factors
eIF-4
Os06g0520600
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH
MIF4G
zf_CCCH_4
zf-CCCH_2
zf-CCCH_4
zf-CCCH_DUS3L
Torus
Caulimovir_coat_dom
Motif
Other DBs
NCBI-ProteinID:
BAF19656
RAP-DB:
Os06g0520600
UniProt:
Q5Z5Q3
LinkDB
All DBs
Position
6
Genome browser
AA seq
711 aa
AA seq
DB search
MPQDDDWFWGRPTPVVVGDGETTSKPKPPVAGKTKKVEEQHPRRPGEPDCSYYVKFGSCK
FGISCVYNHPDPRPQHGADDKKPAEQFPRRPGEPDCSYYVKFGSCKFGMNCRFNHPPRMP
VPPQQEYFSGNACHCHHIEGKSKVEQVKLNVLGLPLRPGTGLCSYYMNRGICKFGTNCKF
DHPDPGSDHEKWVVSSNANQVSSQVNIYSVLDHGESNEHTFTSEEVHQPGIPSFHQRISY
TRDQLLQLCQNVEVPKDILKFCQDINVELNGEDKISGFGAEKDHVQTPSYKRFDATDSRD
WHSWSAQTNWEQKFWDNFSEAKEPYSLGWKQEKFNKPDQSSFHFDSKDQWLKFIKCTPCK
STLIKAEVPLSIQRGIISGKDEVLKTLKSILNTFSPKMFDLQKGQLIETRISSADILKDV
INLIFEKVVAEPAFCSTYAQLCTYLNQNLTPFPPEDCDCEEITFKQALSNKCQEIFESAH
TVCSEIGKLIGQDREMEQRDKERVVKLETLGNINFIRALLKKKLITNKIIDHIVQAVMDC
CKFRFEPLGKVDLLNIIFEGMLDSDSAGDESNICVNAMIGGNKSSIASNDVEMTRKNVNR
QNEEAILQKSYDEVPNNKMDPQKNYADGAISYLIEKEKPTNLESSVRICRGGCSISEIME
LVVDAGAVEGSDEHFMATLLFIKPEYREIFLTLDTREGRLGWLKRMYKVKE
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atgcctcaggacgatgactggttctgggggcgcccgactcccgtcgtcgtcggcgacggc
gagacgacgtcgaagccaaagccgccggtggcgggaaagacgaagaaggtggaggagcag
cacccacggcgaccgggggagccggactgcagctactacgtcaagttcgggagctgcaag
ttcggcatcagctgcgtgtacaaccacccggatccgaggccgcagcatggcgccgacgac
aagaagccggccgagcagttcccgcggcggcccggcgagcccgactgcagctactacgtc
aagttcgggagctgcaagtttgggatgaattgcaggttcaaccaccctccccgcatgcca
gtgccaccacaacaagagtatttctctgggaatgcatgccactgccaccatattgaaggc
aaaagtaaagttgagcaagtaaagctgaacgttcttgggcttccacttcgtcctgggaca
gggttgtgctcatactacatgaaccggggaatctgcaaatttggcactaactgcaagttt
gaccacccagatccaggctcagatcatgagaagtgggtcgtttcaagtaatgccaatcaa
gtttcctctcaggtgaacatttactcggtgcttgaccatggagaatcgaatgagcatact
tttacctccgaagaagtccatcagccagggattccaagttttcaccaacgaatcagttac
acaagggaccaacttctccaactttgtcagaatgtcgaagtgcccaaggacatcttaaaa
ttttgtcaagatattaatgttgaactgaatggtgaagataaaatttcgggatttggagca
gagaaagatcatgtacaaactccatcatataaacggtttgacgcgacagacagccgtgac
tggcattcatggtctgcacaaactaattgggaacagaaattttgggacaacttctctgaa
gcaaaagaaccctattctttaggttggaagcaagagaaatttaacaagcctgaccaatca
agcttccactttgattctaaagatcagtggttaaaatttataaagtgtacaccctgcaaa
agcactttaattaaggctgaagtccctttgtcaatccagagaggcattatctctggcaaa
gatgaagttctgaaaacattgaaaagtatactaaacacattttcaccaaagatgttcgat
cttcagaagggccagctaatagaaacaagaatctctagcgctgatattttgaaggatgtt
attaatcttatatttgaaaaggttgttgctgagccagccttctgttcgacgtatgcgcaa
ctttgcacatatctaaatcaaaacctcacaccattccctcctgaagactgtgattgtgaa
gaaattacgttcaaacaagcactgtcgaacaaatgtcaagaaatattcgaaagtgctcac
accgtatgttctgagattggcaaattgattggacaagaccgagagatggagcaacgggat
aaagaaagggtagtgaaacttgaaacactgggaaatattaatttcattcgagccctgctc
aagaaaaagttgatcacaaataagataatagatcacattgttcaggcagtgatggattgt
tgtaagtttcgctttgaaccacttggaaaagttgatttgctaaatataatatttgaaggc
atgctggattcagattcagcaggtgatgaatctaatatttgcgtcaatgctatgattggt
ggcaataaatcttccatagcttcaaatgatgtcgagatgactcgtaagaatgtcaatagg
caaaatgaagaggcaatattacaaaaatcttatgatgaagtcccaaataacaaaatggat
cctcagaaaaattatgcagatggagcaatcagttatctcattgagaaagagaagccaact
aacttagaatcatctgtgaggatctgtcgaggaggatgcagtatttcagagataatggag
ttagttgttgatgcaggagctgtggaaggcagtgatgagcatttcatggctaccttatta
tttattaaacctgaatatagggaaatatttcttacccttgatacacgtgaaggaagactt
gggtggctgaaaaggatgtacaaggtgaaggaataa
DBGET
integrated database retrieval system
