Oryza sativa japonica (Japanese rice) (RAPDB): Os06g0611500
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Entry
Os06g0611500 CDS
T02163
Name
(GenBank) Similar to Polygalacturonase (Fragment)
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa00040
Pentose and glucuronate interconversions
dosa01100
Metabolic pathways
Module
dosa_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
Os06g0611500
Enzymes [BR:
dosa01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
Os06g0611500
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-ProteinID:
BAF19975
RAP-DB:
Os06g0611500
UniProt:
A0A0N7KME5
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Position
6
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AA seq
425 aa
AA seq
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MAFRNHDAAMVLFFFLLMVTTYANAHGHSKKPEEITQGVYGAAAAVAAGPGGTFDITKLG
AVGNGRADSTGAVMAAWRSACAGAGKQTILIPKGDFMTGAMELRGPCNGAVTIQLDGNLL
GSNDLSKYPGKKMPNWVEVRHVDNFVISGKGKLDGQGPGVWSKNSCAKNYNCKLLPNTLV
LNTVNDGVVSGITLLNAKFFHMNIYRCKDIKISGVTINAPGDSPNTDGIHMGDSSKITIA
ATTIGTGDDCISIGPGTDGVNITGVTCGPGHGISIGSLGRYKDERDVRDVSVTRCVLRKT
TNGLRIKSYEDSVSPVTVSKVSYDGVVMDHVDNPIIIDQKYCPNSICTSKGDSKVSVRDV
TFRNITGSSNTPAVVQLLCSGKLPCSGVAMQDVRVLYGGSDKKTTAVCDHALGKSTGCLK
ELACL
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atggctttcagaaaccatgacgctgccatggtcctcttcttcttcctcctcatggtgact
acctacgccaacgcgcacggacacagcaagaagcccgaggagatcactcagggcgtttac
ggggcggcggcggcggtggcggccggccccggcggcacgttcgacatcaccaagctcggc
gccgtcggcaacggcagggcggacagcaccggcgcggtgatggcggcgtggaggtcggcg
tgcgccggcgccgggaagcagacgatcctgatccccaagggggatttcatgacgggggcg
atggagctcaggggcccctgcaatggcgccgtgaccatccagctcgacggcaacctgctg
ggctccaacgacctcagcaagtacccgggcaagaagatgcccaactgggtcgaggtccgc
catgtcgacaacttcgtcatctccggcaagggcaagctcgacggccagggccccggcgtc
tggagcaagaactcctgcgccaagaactacaactgcaagctcctccccaacacgctggtg
ctgaacacggtgaacgacggggtggtgagcgggatcacgctgctgaacgccaagttcttc
cacatgaacatctaccggtgcaaggacataaagatcagcggcgtgaccatcaacgccccg
ggggacagccccaacaccgacggcatccacatgggcgactcctccaagatcaccatcgcc
gccaccaccatcggcaccggcgacgactgcatctccatcggccccggcaccgacggcgtc
aacatcaccggcgtcacctgcggccccggccacggcatcagcatcggcagcctcggccgg
tacaaggacgagcgggacgtccgggacgtctccgtcacccgctgcgtcctccgcaagacc
accaatggcctccggatcaagtcgtacgaggactccgtgtcgccggtgaccgtgtccaag
gtgtcctacgacggcgtcgtcatggaccacgtcgacaaccccatcatcatcgaccagaag
tactgccccaacagcatctgcaccagcaagggcgactccaaggtgtccgtcagggacgtc
accttcaggaacatcaccgggtcgtccaacacgccggcggtcgtccagctgctctgctcc
ggcaagctgccgtgcagcggcgtcgcgatgcaggacgtcagggtgctgtacggcggcagc
gacaagaagaccacggccgtctgcgaccacgcgctggggaagtccaccgggtgcctcaag
gagctcgcttgcctctaa
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