Oryza sativa japonica (Japanese rice) (RAPDB): Os06g0622500
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Entry
Os06g0622500 CDS
T02163
Name
(GenBank) Tetratricopeptide-like helical domain containing protein
KO
K03350
anaphase-promoting complex subunit 3
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
Os06g0622500
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
dosa01009
]
Os06g0622500
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dosa04121
]
Os06g0622500
03036 Chromosome and associated proteins [BR:
dosa03036
]
Os06g0622500
Protein phosphatases and associated proteins [BR:
dosa01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-5
PP5-interacting proteins
Os06g0622500
Ubiquitin system [BR:
dosa04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Other subunits
Os06g0622500
Chromosome and associated proteins [BR:
dosa03036
]
Eukaryotic type
Sister chromatid separation proteins
APC/C complex
Os06g0622500
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_8
TPR_12
ANAPC3
TPR_11
TPR_19
TPR_16
RMD1-3
TPR_17
TPR_CcmH_CycH
CFAP70_TPR_C
CFAP70_mid_TPR
TPR_9
TPR-S
ARM_TT21_C
TPR_Psidin_N
ARM_TT21_2nd
TPR_NPHP3
TPR_10
TPR_Slam
TPR_INTS8_3
HIR3_bundle
DUF294_C
TTC22_C
Motif
Other DBs
NCBI-ProteinID:
BAF20013
RAP-DB:
Os06g0622500
UniProt:
Q0DAW0
LinkDB
All DBs
Position
6
Genome browser
AA seq
724 aa
AA seq
DB search
MVDRVHGSLRLFMHRNAVFLCERLCAQFPAETNVQLLATCYLHNNQPYAAYHILKGFFNT
FPKYKECMFQVVQQGTTFLEYTGRVEAAAEQFVQALTLDPLLWAAYEELCILGVAEDANE
CFSEATALRLQQELTSTSNVEKSNFVNENRFLSSNVSASFGDSPKQIKQLHANTTAEVSG
YPHVKSTALHMQNGAPSNLSQFDTPSPTSTQASGIAPPPLFRNMHAYQNTAGGNAPSKPK
VNAPNLTLRRKYIDEAGLKKVSGRLFNQSSDSVPRRSARLSRDTTINSNSNISQFGGNGT
DHSSGNRYHVVDEMWTDNVTSTSSSTSIVDGRYPEQEKSERVLSQDSKLAIGIRELMALL
RTLGEGYRLSCLFKCQEALEVYRKLPEAQFNTGWVLCQVGKTYFELVNYLEADHFFELAH
RLSPCTLEGMDIYSTVLYHLNEEMRLSYLAQDLVSIDRLSPQAWCAVGNCFALRKDHETA
LKNFQRAVQLDSRVAYAHTLCGHEYSALEDYENSIKLYRSALQVDERHYNAWYGLGVVYL
RQEKFEFAEHHFRRAFQINPCSSVLMCYLGMALHALKRNEEALEMMENAIFADKKNPLPK
YQKALILLGLQKYPDALDELERLKEIAPHESSMYALMGKIYKQLNILDKAVFCFGIALDL
KPPAADVAIIKSKEMEKAQGWIASVSQLCSTLKGQSNHHDGGRLAIIAHEVRQKALSSTK
QLAI
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atggtggaccgcgtccacggcagcctccgcctcttcatgcaccgcaacgccgtcttcctc
tgcgagcgcctctgcgcccagttccccgccgagacaaatgtccagttgctagcgacttgc
taccttcacaacaaccagccatatgctgcataccacatcttgaaaggcttcttcaatact
tttccaaaatataaggaatgcatgttccaagtggtgcaacagggcactaccttcttggag
tacactggcagagtggaagctgcagctgagcaatttgtacaagctctgactcttgatcct
cttctatgggcagcatacgaggaattgtgcatactaggtgttgctgaagatgcaaatgaa
tgtttcagtgaagcaacagctctacgtcttcagcaggaactcacatccacatcaaatgtg
gaaaagtcaaactttgttaatgaaaatcggtttctatcttccaatgtgtcagcaagtttt
ggtgatagtcctaagcaaattaaacagctgcatgctaacaccactgcagaagtatctggt
tatcctcatgtaaagtcaactgcattgcatatgcagaacggtgcaccatctaatttatca
cagtttgacactccatcgccaacttcaacgcaggcttctggcattgctccaccaccactc
tttcggaatatgcatgcttatcagaatacagcaggtggcaatgctccttccaaaccaaag
gttaatgctccgaacctgacactccgaagaaaatacatcgatgaagcaggcctaaagaag
gtttctggaaggctgtttaatcagagtagtgattcagttcctcgaagaagtgcaagactt
tctagagatacaacaataaactcaaactcaaatatctctcaatttggagggaatggaaca
gatcactcgtcaggaaacaggtaccacgttgttgatgaaatgtggacagataatgtaact
tcaacttcgtcttctacaagtatagttgatggaagatatcccgagcaagagaaatctgaa
cgagttctgtcacaggactccaaattagctattggtatcagggagctaatggcactcttg
cggacactaggggaagggtataggctttcttgcttgtttaagtgtcaggaagcattggaa
gtatatagaaagctcccagaggcacaatttaatactggatgggttctttgccaggttggg
aagacatattttgaactcgtcaattatttagaagccgatcatttttttgagttagcgcat
cgactatcaccatgcacgttggagggaatggacatttactccactgttctttatcatttg
aatgaggaaatgcggctaagttaccttgctcaagatcttgtttctattgatcgactatct
ccccaagcatggtgtgctgtgggaaattgctttgccttgaggaaagatcatgagactgcc
ttgaagaattttcaacgtgctgtacagcttgactcaagagttgcatacgctcacacgcta
tgcggtcacgagtattctgcattggaggattatgagaacagtataaaactataccgctct
gcacttcaggtagatgaaagacactacaatgcctggtatggccttggagtggtgtacctt
cgccaggaaaagtttgagtttgctgagcatcatttcagaagggcattccagataaatcct
tgctcttctgttcttatgtgctatcttgggatggccttgcatgctttaaagaggaatgag
gaagccttggaaatgatggagaacgctatatttgctgataagaagaatccactccccaag
tatcaaaaggctttaatccttctaggcctacaaaaataccctgatgctctggatgagttg
gaacggctaaaggaaattgcacctcatgaaagtagtatgtatgcactgatgggaaagatt
tacaagcaacttaacattcttgacaaggctgtattttgctttggcattgccctggatttg
aaacctcctgctgctgacgttgctataatcaagtcaaaagaaatggagaaggcacaagga
tggattgcttcagtgagtcagctttgttccactctaaaaggccagagcaatcatcacgat
ggcggccggctcgcaattattgctcatgaagtcaggcagaaagcgttgtcgtcgacaaaa
caattagcgatctaa
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integrated database retrieval system
