Oryza sativa japonica (Japanese rice) (RAPDB): Os06g0643600
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Entry
Os06g0643600 CDS
T02163
Name
(GenBank) Formamidopyrimidine-DNA glycolase family protein
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Os06g0643600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dosa03400
]
Os06g0643600
Enzymes [BR:
dosa01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
Os06g0643600
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
Os06g0643600
DNA repair and recombination proteins [BR:
dosa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Os06g0643600
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
Fpg-like_C
Motif
Other DBs
NCBI-ProteinID:
BAF20093
RAP-DB:
Os06g0643600
UniProt:
Q0DAN0
LinkDB
All DBs
Position
6
Genome browser
AA seq
400 aa
AA seq
DB search
MPELPEVEAARRALEAHCVGRRIARCAVADDPKVVVAAAGGRVAFERAMVGRTIVAARRR
GKNLWLRLDAPPFPSFQFGMAGAIYIKGVPVTKYKRSVVSSTDEWPSKYSKFFVQLDDGL
EFSFTDKRRFARVRLFEDPETVPPISELGPDALFEPMSSDSFADSLSRKKIGIKALLLDQ
SFISGIGNWIADEVLYQSRTHPLQIASSLSRESCEALHQSIQEVVKYAVEVDADCDCFPV
EWLFHHRWGKKPGKVNGQKIEFITAGGRTTAYVPQLQKLTGMQSSKVVIANPEQVAENDD
AKEIDTDPEDADNLNTKKRGATSRVARGKQKRDAIGALSRKTRKNGGGKEKPGSDYSEDD
GETAEPNKVSTSSKGEKADPVRRSSRTASKPRQVNKLKER
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgccggagctgccggaggtggaggcggcgaggagggcgctggaggcgcactgcgtgggg
aggaggatcgcgcgctgcgcggtggcggatgaccccaaggtggtggtcgccgccgccggg
gggcgcgtggcgttcgagcgcgccatggtcggccggaccatcgtcgccgcgcggcggagg
ggcaagaacctctggctccgcctcgacgcccctccattcccctccttccagttcgggatg
gcaggtgcgatctacattaagggagttcctgtgaccaagtacaagagatcagttgtcagt
tctacagacgagtggccctccaagtactccaaattttttgttcaacttgatgatggctta
gagttttccttcactgataagaggcggtttgcaagagttcggttgtttgaagatcccgaa
actgtacccccgatttctgagttaggaccagatgctctctttgagccgatgtcttctgac
agttttgcggactcgctgagcagaaagaagattggaataaaagctcttctactcgatcag
agcttcatatcaggaattggtaattggattgcagatgaggtgctttaccagtcgagaacc
catccattacagattgcttcaagtctatccagggagagttgtgaagcactacaccaaagc
atccaagaggttgtgaaatatgctgttgaagttgatgctgattgtgactgctttcctgtg
gaatggttattccatcaccgatggggcaagaagcctggtaaagtcaatggacagaaaatt
gagttcataacagctggtggcaggactacagcatacgtgccacaactgcagaagctgact
ggaatgcaatctagcaaagtagtcattgctaacccagaacaagtggcagagaacgatgat
gcgaaggaaatagacacagatccagaagatgctgataatttgaatacaaagaagcgagga
gcaacttctagggttgccaggggaaagcaaaagagagatgccataggtgccctttccaga
aagacaaggaaaaatggtggtggcaaggagaaaccaggtagtgactatagtgaagatgat
ggtgagactgctgaaccaaacaaagttagcaccagtagcaagggcgagaaggcagatccg
gtgagaagatcatcaaggaccgcatcgaaaccccgccaggtaaataaattaaaagaaaga
tag
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