Oryza sativa japonica (Japanese rice) (RAPDB): Os06g0724600
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Entry
Os06g0724600 CDS
T02163
Name
(GenBank) Similar to Transformer-SR ribonucleoprotein (Fragment)
KO
K12897
transformer-2 protein
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
Os06g0724600
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
dosa01009
]
Os06g0724600
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dosa03041
]
Os06g0724600
Protein phosphatases and associated proteins [BR:
dosa01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
Os06g0724600
Spliceosome [BR:
dosa03041
]
Common components
Common spliceosomal components
SR proteins
Os06g0724600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_DEAH11
RRM_occluded
RRM_5
THRAP3_BCLAF1
Motif
Other DBs
NCBI-ProteinID:
BAF20528
RAP-DB:
Os06g0724600
UniProt:
Q0D9E5
A0A0P0X1N6
LinkDB
All DBs
Position
6
Genome browser
AA seq
164 aa
AA seq
DB search
MAETPERRRYSGSPSPYRGNPKSRSRSRSPAARSQSRSPVPDPRSQARSRSRSREREPDA
VNHGNTLYVTGLSSRVTERELKDYFSKEGRVTSCHVVLEPHTRVSRGFAFVTMDTVEDAE
RCIKYLNQSVMEGRNITVEKKRLCKLCATIKMLSSSISTLAHTA
NT seq
495 nt
NT seq
+upstream
nt +downstream
nt
atggcggagacccccgagcgcaggaggtactcagggtccccctctccttacaggggaaac
ccaaaatcaaggtcaagatcacgatcacctgctgctcgatcccagtctaggtctccagtc
cctgaccctagatctcaggcaaggtcaagatcaagaagccgcgagagggagcctgatgct
gtaaatcatggaaatacactgtatgtgactggactctcttctcgagtgactgaaagagaa
cttaaagattacttctctaaagaaggaagggtgactagttgccatgttgtccttgaaccc
catacacgtgtttctcgtggatttgcttttgtcaccatggacactgttgaagatgctgaa
cgctgtatcaagtatcttaaccagtctgtaatggaaggccggaacatcacagttgaaaag
aagagattgtgcaagctatgtgcaacaatcaagatgctgagttcatcaatttcaacttta
gctcatacagcttga
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