Oryza sativa japonica (Japanese rice) (RAPDB): Os07g0188000
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Entry
Os07g0188000 CDS
T02163
Name
(GenBank) Similar to Argonaute 4 protein
KO
K11593
eukaryotic translation initiation factor 2C
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dosa03019
]
Os07g0188000
03036 Chromosome and associated proteins [BR:
dosa03036
]
Os07g0188000
Messenger RNA biogenesis [BR:
dosa03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
Os07g0188000
Chromosome and associated proteins [BR:
dosa03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
Os07g0188000
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
Os07g0188000
microRNA pathway
RISC loading complex
Os07g0188000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-ProteinID:
BAF20993
RAP-DB:
Os07g0188000
UniProt:
Q6Z4F1
LinkDB
All DBs
Position
7
Genome browser
AA seq
1052 aa
AA seq
DB search
MASRGGDGLVGGGRGPLGGRDGRGRGPAGGRGGGRGGGHPQQQQQQQPGYGRGDGGGRGP
APAAGGVVGRGTGGGGGGGRGDGGRGRGRGGGGGDGVRPAMAAAPAASTPGPVAVAARST
PPPTPAVQIPAVASSSSAQPAAAAQPPPAAAAVSALARDVGRQLAVVAGGGRPAPPAAPP
APIPVSSKGVAPPSRPGFGTVGERIVVRANHFLVRVSDNDMIYLYDVSLSPPPKTRRINR
VVMSELARLHRESHLGGISFAYDGSKALYTAGKLPFDSMDFKIKLGKELREIEYKVTIRR
AGQADLHHLHEFIAGRQRDSQQQTIQALDVVLRESPSLNYVIVSRSFYSTMFGRQDIGDG
LECWKGYYQSLRPTQMGLSLNIDISSTPFFKPISVVEYVKNCLGTPTNANGPDPRRPLSD
IDRLKVKKALRGVRVETTHQGKSSKYKITTITSEPLSQLNFSMDGTTQTVIQYFSQRYKY
RLQYTSWPCLQSGNPSNPIYLPMEVCTIVEGQRYSKKLNDKQVTGLLRATCQPPQKREQK
IIEMVQHNNYPADKVVSDFRINISNQMATMPARVLPAPTLRYHDSGKEKTCNPRVGQWNM
INKKMVGGAVVQKWTCVNFSRMHIDAVHRLCGELVYTCNAIGMVFNEMPEIEVGSAAPNN
IEAALSNIHTRAPQLQLLIVILPDVNGYYGRIKRVCETELGIVSQCLKPGRKLLSLDRQF
LENVSLKINVKAGGRNSVLQRPLVPGGLENTTIIFGADVTHPASGEDSSASIAAVVASMD
WPEITKYKALVSAQPPRQEIIQDLFTMTEVAQNADAPAQKAEGSKKNFICGGMFRELLMS
FYSKNAKRKPQRIIFYRDGVSDGQFLHVLLYEMDAIKKAIASLDPAYRPLVTFVVVQKRH
HTRLFPEVHGRQDLTDRSGNVRPGTVVDTNICHPSEFDFYLCSHAGIQGTSRPTHYHVLH
DENRFSADQLQMLTYNLCYTYARCTRSVSVVPPAYYAHLAAFRARYYDEPPAMDGASSVG
SGGNQAAAGGQPPAVRRLPQIKENVKDVMFYC
NT seq
3159 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcacgcggcggcgacggcctcgtcggaggagggcgcgggcccctcggtgggcgg
gacggtagagggcgcggcccggccggtgggcgaggcggcggaaggggaggcggccacccg
cagcagcagcagcagcagcagccgggctacggccgcggcgacgggggcggccgtggtcct
gcccctgctgctggtggtgtcgttggtcgaggaactggaggcggcggcggcggcgggcgc
ggggacggcggacgcggccgtggccgtggcggcggcggcggagatggcgttcgccctgct
atggccgcggctccggcggcgtcgactcctggtccggttgctgttgctgctcggagtact
cctcctcctactcccgcggtccagatccccgcggtggcgtcgtcgtcgtcagcgcagcca
gcggcggcggcgcagcctcctccggcagccgcggcggtttctgccctcgcgagggacgtt
gggaggcagctggctgtcgtggcgggcggcggccgccccgctccccccgcggcgccgccg
gcgcccatcccggtgtcgagcaagggcgtcgcgccaccgtcgcggccggggttcgggacg
gtgggggagaggatcgtggtgcgcgcgaaccatttcctcgtccgcgtctccgacaacgac
atgatctacctctacgacgtgagtttgagtcccccaccaaagaccaggcgcatcaacagg
gtagtgatgtctgagctggccaggttgcaccgtgagtcgcatctcggtggcataagcttc
gcgtacgacggaagcaaggccctgtacactgcaggaaaactgccgttcgactccatggac
ttcaagatcaagctgggcaaagagctcagggaaatcgagtacaaggtgacaattcgacgt
gctggccaagcagatctgcaccacctgcacgagttcatcgccggccggcagagggactct
cagcagcaaacgatccaagcactggacgttgtactgagggagtcaccttctctgaactat
gtcatcgtttctcggtcgttctactccactatgttcggccgacaagacattggtgatggg
ctggaatgctggaaaggatactatcagagcctgcgcccaactcagatgggactctcattg
aacatagacatatcctctaccccattcttcaaacctatcagcgtggtagaatatgtcaag
aattgtctgggcacacctactaatgctaatggccctgaccctaggcggcctctttctgac
attgatcgcctgaaggttaagaaagcactacggggagttcgtgttgaaacaacacaccag
gggaagagcagcaagtacaagatcactacgattacatctgagccactgagtcagctgaac
ttttctatggatggaactacccagactgttattcagtacttctcgcagcggtacaaatac
aggctgcagtacacgtcttggccctgtctgcaatccggcaacccttctaaccctatatat
ttgccaatggaggtatgcaccattgtagaagggcaaagatactccaagaagctcaatgac
aaacaagtgactggcctcctgagagcaacatgccagcctccccagaaaagggagcagaaa
atcattgagatggttcaacacaacaactacccggctgataaggtggtgagtgattttaga
attaatatttccaatcagatggccactatgccagctcgcgtgctgcctgcgcccacgctg
agataccatgactctggaaaggagaaaacttgtaatcccagagttgggcaatggaatatg
atcaataagaaaatggttggtggagctgtggttcaaaagtggacttgcgtgaatttttca
cgcatgcatattgatgccgtgcacagactatgcggcgaactagtttatacatgcaatgct
attggcatggttttcaatgaaatgccagagatagaggtggggtcagctgctcctaataac
atcgaagctgccctgagcaacattcacacaagggctcctcaactccagctgctcattgtg
attctcccagatgttaatgggtattatggaagaattaagagggtgtgtgagactgaactt
gggatagtatcccagtgcctcaagccaggccgcaagctcttgagcttagacaggcagttc
ctggaaaatgtctcactcaaaatcaatgtcaaggctggaggacgcaactcagttcttcag
agacctcttgtacccggtgggcttgaaaacacaacaataatttttggtgccgatgtcacc
catcctgcttctggagaggactcatcggcgtcgatcgcagctgtggtggcctccatggac
tggcctgagatcaccaagtacaaagccctcgtctctgcccagccacctcggcaggagatt
atacaagatctcttcaccatgactgaagttgcgcagaatgctgatgctccagcacagaag
gctgaaggttcgaagaagaatttcatatgcggcggaatgttcagggagttgcttatgtca
ttctacagtaagaatgctaaacgtaagcctcaaaggataatattttacagggatggtgta
agtgatggacaattccttcatgttctgctctatgagatggacgcaatcaagaaggctatt
gcatctttggacccagcatacaggcccctggtgacatttgtggttgtccagaagaggcac
cacacaaggctcttccctgaggtgcatggaaggcaagatctgacggacagaagtggaaat
gttcgtccaggaaccgtggttgacactaacatttgccaccctagtgagttcgacttctac
ctgtgcagccatgccggaatccagggaacaagcagaccaacccactaccacgttctccat
gacgagaaccgttttagtgccgatcagctgcagatgctcacttacaatttgtgttacacc
tacgctcgatgcacccggtctgtctctgttgtccctccagcctactacgctcacctggca
gcattccgggcgaggtactacgatgagccccccgccatggacggagcttcgtcggtcggc
agcggcggcaaccaggcggcggccggcggccagccaccggcggtgcgccgcctcccgcag
atcaaggagaacgtcaaggacgtgatgttctactgctga
DBGET
integrated database retrieval system
