Oryza sativa japonica (Japanese rice) (RAPDB): Os07g0200700
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Entry
Os07g0200700 CDS
T02163
Name
(GenBank) Similar to Squalene synthase (EC 2.5.1.21)
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa00100
Steroid biosynthesis
dosa00909
Sesquiterpenoid and triterpenoid biosynthesis
dosa01100
Metabolic pathways
dosa01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
Os07g0200700
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
Os07g0200700
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
dosa01006
]
Os07g0200700
Enzymes [BR:
dosa01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
Os07g0200700
Prenyltransferases [BR:
dosa01006
]
Terpene biosynthesis
Squalene/phytoene synthase
Os07g0200700
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
Motif
Other DBs
NCBI-ProteinID:
BAF21043
RAP-DB:
Os07g0200700
UniProt:
B9FW21
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Position
7
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AA seq
410 aa
AA seq
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MGVVGALLGPEAEALVRLRAAAWRLRREVAAATDDDEHWAFAYSMLHRVSRSFAIVIQQL
GPDLRNAVCVFYLVLRALDTVEDDTSIPTEIKVPILQEFHRHIYNRDWHFSCGTKDCKIL
MDKFHYVLTAFLELGSGYQEAIEEITRRMGAGMAKFICKEVETVDDYDEYCHYVAGLVGI
GLSRLFHAAGLEDLAPESLSNSMGLFLQKVNITRDYLEDINEIPKSRMFWPREIWSKYVD
KLEDLKYENNSVKAVKCLNEMVTNGLIHTEDCLRYMSALKDITILRFCAIPQVMALATYA
LCYNNVNVFRGVVKLRRGLTARIINETNSMADVYTAFYEFSSLLAEKIDDNDPNASLTRK
RVNAIKETCKSSGLLKIRGYDLDRPKRNPAMIMMLLLLLVAIFLGALYRR
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgggggtggtgggggcgttgctgggaccggaggcggaggcgctggtgaggctgcgggcg
gcggcgtggcggctgcggagggaggtcgccgccgccaccgacgacgacgagcactgggcc
ttcgcctactccatgctgcaccgcgtctcccgcagcttcgccatcgtcatccagcagctc
ggccccgacctccgcaatgccgtgtgcgtcttctacctcgtgcttcgggcgctcgacacc
gtcgaagatgatactagcatccctactgagattaaggtgcccattcttcaggaattccac
cgtcatatctataaccgggattggcatttctcatgtggaacaaaggactgcaagattctg
atggataaattccactatgttttgacagctttcttggagcttggttcaggataccaagag
gcaattgaagaaattaccaggagaatgggtgcaggaatggcaaagtttatatgcaaggag
gttgaaactgttgatgattatgatgagtactgtcactatgtggcagggctagtcggcatt
ggactttcaaggctctttcatgctgctgggttagaagatcttgctcccgaatcgctttct
aattcaatgggtttatttttgcagaaagtcaatattactcgggattacctggaggacata
aatgagataccaaaatcacgcatgttctggccacgagaaatatggagtaaatatgttgac
aaacttgaggatctcaaatacgaaaataattcagtgaaggcagtaaaatgcttgaatgag
atggtgactaatggtttaatacatactgaagattgccttcggtatatgtctgctctaaag
gatattactattctccgtttttgtgcaataccccaggtaatggcacttgcaacctatgct
ctgtgctataacaatgtgaatgtatttcgaggagttgtgaagttgaggcgtgggctgact
gcacgaataatcaatgaaacaaattctatggctgatgtgtacactgctttctatgaattc
tcttcactgcttgcagaaaagattgatgataatgatccaaatgcgtcgcttacacggaaa
cgtgtgaatgcaataaaggagacctgcaaatcatccggtttgctgaagataaggggatat
gacttggataggccaaaaaggaaccctgctatgatcatgatgctactgctgctcttggta
gctattttcttgggagctctgtataggaggtga
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