KEGG   Oryza sativa japonica (Japanese rice) (RAPDB): Os07g0252000
Entry
Os07g0252000      CDS       T02163                                 
Name
(GenBank) WD40-like domain containing protein
  KO
K24730  cytosolic iron-sulfur protein assembly protein CIAO1
Organism
dosa  Oryza sativa japonica (Japanese rice) (RAPDB)
Brite
KEGG Orthology (KO) [BR:dosa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:dosa03036]
    Os07g0252000
   03400 DNA repair and recombination proteins [BR:dosa03400]
    Os07g0252000
Chromosome and associated proteins [BR:dosa03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    Os07g0252000
DNA repair and recombination proteins [BR:dosa03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     Os07g0252000
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 WDR55 Beta-prop_TEP1_2nd EIF3I ANAPC4_WD40 WD40_MABP1-WDR62_2nd Beta-prop_RIG_2nd Beta-prop_WDR19_1st Beta-prop_EIPR1 Beta-prop_IFT140_1st Beta-prop_WDR35_TULP_N Beta-prop_IFT122_1st Beta-prop_WDR75_1st NBCH_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C Beta-prop_Vps41 WDR90_beta-prop_4th Beta-prop_HPS5 Beta-prop_ELP1_1st WD40_MABP1-WDR62_1st Beta-prop_DCAF12 Beta-prop_NUP159_NUP214 eIF2A B-prop_COPA_B_2nd PROPPIN RMC1_N Beta-prop_Nup120_160
Other DBs
NCBI-ProteinID: BAF21216
RAP-DB: Os07g0252000
UniProt: Q0D7F7
LinkDB
Position
7
AA seq 353 aa
MAMDGGAAAVLREAHRLTGHTDRVWSLAWNPSPGAGAGPVLASCGGDKAVRIWKRAADGA
WQCSDVLEDTHNRTVRSCAWSPDGKLLATASFDSTTAIWEYSGGDFECVATLEGHENEVK
SVSWSASGSLLATCSRDKSVWIWEMQPGNEYECVSVQQGHTQDVKMVQWHPILDVLVSVS
YDNSIRVWADDGDDEWHCVQTLTEANNCGHSSTVWALSFNQKGDRMVTCSDDHTLKIWDT
SADLSQPKTSDNQESWRHLSTLTGYHNRTIFSAHWSSEDIIASGAGDDAICLFAEDKSSM
VEGPSYRLILKKEKAHDMDINCVRWCPQDPRMLASASDDGTVKLWELRGNALD
NT seq 1062 nt   +upstreamnt  +downstreamnt
atggccatggacggcggcgcggcggcggtgctgcgcgaggcccaccgcctgacggggcac
accgaccgcgtgtggtccctcgcgtggaacccttcccccggcgccggcgccggccccgtc
ctcgcctcctgcggcggcgacaaggccgtccggatctggaagcgcgccgccgacggcgca
tggcagtgctcggatgtgctggaggacacgcacaaccgcacggtgaggtcgtgcgcatgg
tcccccgacgggaagctgctggccaccgcgagcttcgactccaccaccgcgatatgggag
tactccggcggcgacttcgagtgcgtcgccaccttggagggccatgagaatgaggtgaag
agcgtgtcgtggagcgcgtccgggtcgctgctcgcgacgtgcagccgggacaagtcggtg
tggatatgggagatgcagccaggaaacgaatacgagtgtgtctcggtgcagcaaggccac
acacaagacgtgaagatggtgcagtggcaccctatccttgatgtcctggtttctgtcagc
tacgacaattcaatcagagtctgggctgatgacggtgatgatgagtggcactgtgtacag
acattaactgaagctaataactgtggtcactcgtcaacagtatgggcattatcttttaac
cagaaaggtgataggatggtcacatgcagtgatgaccatacattgaaaatatgggacaca
agtgctgatttgtctcaaccaaaaactagtgacaaccaggaatcatggcgacatctttct
actctcacgggatatcataaccggaccattttttcagcccattggtcaagcgaggatatt
atagccagtggcgcaggtgatgatgcaatctgcttatttgctgaggacaagagtagtatg
gttgagggaccttcatacagattaattttaaagaaagagaaggcacatgacatggatata
aactgtgtccgctggtgtcctcaggacccgaggatgttggcatcagcaagtgatgatggc
acagtgaaattgtgggagctgagggggaatgcactggattga

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