KEGG   Oryza sativa japonica (Japanese rice) (RAPDB): Os07g0530100
Entry
Os07g0530100      CDS       T02163                                 
Name
(GenBank) Tyrosyl-DNA phosphodiesterase family protein
  KO
K10862  tyrosyl-DNA phosphodiesterase 1 [EC:3.1.4.-]
Organism
dosa  Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:dosa00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    Os07g0530100
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:dosa03400]
    Os07g0530100
DNA repair and recombination proteins [BR:dosa03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     Os07g0530100
SSDB
Motif
Pfam: Tyr-DNA_phospho FHA_2 Yop-YscD_cpl FHA
Other DBs
NCBI-ProteinID: BAF21758
RAP-DB: Os07g0530100
UniProt: B7EG59 Q7XHY3
LinkDB
Position
7:complement(21399664..21409614)
AA seq 671 aa
MTSSSRVRVGNLVPLNEGNASSSNGSVSSIPIYLGANVVGRNHLVVVDKRVSRKHLSLHA
SADGSIEAVVEGPNPIIVRSEGQRRKVCAQERVKIAHDDVLELIPGEYFVKYLNVGDNHK
SSTSMGSSDFKKGKRLCEDDTVVIKRNRQIMEDEALARSLQKSFAEESSTISGLGCDQML
SSLDSAGFSERNNERIHSVDYLKDVLSLTFRLMRVQGLPSWTNTSSVTIQDVIQGEVLLA
VLSNYMVDMEWLLTACPSLRKVRHVLVIHGEDGASVELLKKVKPANWILHKPPLPISFGT
HHSKAMLLVYPQGIRVVVHTANLIHVDWNNKTQGLWMQDFPWKDAKDVNRSVSFENDLVD
YLSAIKWPEFRVNLPVVGDVNINAAFFRKFDYKSSSVRLIGSVPGYHVGPNIKKWGHMKL
RSVLEGCTFEQQFCKAPMIYQFSSLGSLDEKWMSEFAFSLSAGKSDNGSPLGIGKPLIVW
PTVEDVRTSIEGYAAGSCIPSPQKNVEKDFLRKYWARWKADHVGRCRAMPHIKTFTRYNG
QDIAWFLLTSANLSKAAWGALQKNNTQLMIRSYELGVLFLPKTHQSVPQFSCTGKNNSNL
NNLAPGKEIKTKLVTLCWKSDEEKEQSTEIIRLPVPYQLPPKPYGTEDVPWSWDKRYTKK
DVYGSVWPRHG
NT seq 2016 nt   +upstreamnt  +downstreamnt
atgacgtcctcgtctcgagtaagggttggcaatctagtccccctcaatgaaggaaatgcg
agctcgtcaaatggatcggtgtcaagcattcctatctatctgggtgccaatgttgtaggg
aggaatcatttggtggtcgtcgacaagagagtcagccgcaagcatctgagcctacatgcc
tcggcggatggttccattgaagcggtagtggaaggaccaaatcctatcattgttcgatct
gagggccagaggaggaaggtctgtgctcaagagagagtaaagattgcacatgatgatgtc
ctggaactcatccctggtgaatattttgtgaagtatttgaatgtgggcgataaccataaa
agttccacatcaatgggttcaagtgattttaaaaaggggaagaggctctgtgaggatgat
actgtagttatcaaaagaaatcgtcagattatggaagatgaggctttggcaagaagttta
cagaaaagctttgcagaagaaagttcaactatttccggtttgggttgtgatcaaatgtta
agttcacttgatagtgctggtttttctgagagaaataacgagagaatacactctgttgat
tatctgaaagatgtactttcattgacttttcggctcatgcgtgtccaaggtcttccttca
tggactaatacttcctcagttaccattcaagatgtcatacagggtgaagtgcttcttgct
gtactctcaaattatatggtggacatggaatggctgcttacagcatgtccaagcttaagg
aaagttcgacatgtcctagttatacatggagaagatggtgcatcagtggagcttctgaag
aaagtgaagccagccaattggatccttcacaagcctccacttccaatttcatttggaaca
catcattcaaaggccatgctgcttgtatatcctcaagggattcgtgttgttgtgcacaca
gcaaatttgatacatgtcgactggaataacaaaactcaggggctatggatgcaagatttt
ccctggaaagatgcaaaagatgtgaatagaagtgtttcctttgaaaacgatttggttgat
tatctgagtgcaattaagtggcctgagttcagggtaaatttaccagtggttggtgatgtc
aacatcaatgcagcattctttaggaagtttgattataagagctcatcggtcaggttgatt
ggatccgttcctggttatcatgttggccccaatattaaaaagtggggtcatatgaagctt
aggagtgttcttgaagggtgcacatttgaacaacagttttgcaaggctcccatgatttat
cagttctcttccttggggtcacttgatgagaaatggatgagtgagtttgcattctcacta
tcagctggtaaatcagataatggttcacctttgggtattggtaaaccactgattgtctgg
cctacagtggaggatgttaggacatcaatagagggttatgcagctggtagttgcattcca
agccctcaaaagaatgttgaaaaagatttcttgaggaagtattgggccaggtggaaagcg
gaccatgtgggtcgttgtcgtgcgatgcctcacataaaaacttttactcgatacaatggt
caagacattgcatggtttctactaacctcggcaaatttaagcaaagctgcttggggtgcg
ttgcagaagaataatacacaactgatgatacgctcatatgagttaggtgtactgttcttg
cccaaaactcaccaatctgtaccacaattttcatgtacggggaagaacaattcaaacctg
aataacctggcccctgggaaagagatcaaaaccaaactggtcacactctgctggaaaagc
gacgaagaaaaagaacaatccacggaaattatcagattgccagtgccatatcaacttcct
ccaaagccttacggcacagaagatgtcccatggtcttgggacaagaggtacacaaagaag
gacgtgtatggttcagtctggccgcgccatggttag

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