Oryza sativa japonica (Japanese rice) (RAPDB): Os07g0573600
Help
Entry
Os07g0573600 CDS
T02163
Name
(GenBank) REX1 DNA Repair family protein
KO
K10845
TFIIH basal transcription factor complex TTD-A subunit
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa03022
Basal transcription factors
dosa03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Os07g0573600
09124 Replication and repair
03420 Nucleotide excision repair
Os07g0573600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dosa03021
]
Os07g0573600
03400 DNA repair and recombination proteins [BR:
dosa03400
]
Os07g0573600
Transcription machinery [BR:
dosa03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
Os07g0573600
DNA repair and recombination proteins [BR:
dosa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
Os07g0573600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb5
Motif
Other DBs
NCBI-ProteinID:
BAF21982
RAP-DB:
Os07g0573600
UniProt:
Q0D591
LinkDB
All DBs
Position
7
Genome browser
AA seq
131 aa
AA seq
DB search
MPDLRLRSSALSRAPPPPPLQAPCSSPVCSYRSVQRRTGAREDNSTGRRQRWHSVLQRAE
NMVNAIKGLFISCDVPMAQFIVNLNASMPASDKFILHMLDPTHMFVQPHVAEMIRSKISE
FRDQNSYEKPT
NT seq
396 nt
NT seq
+upstream
nt +downstream
nt
atgcctgacctccgcctccgatcctccgccctgagccgcgcgccgccgccgccgccgctg
caggctccttgttcctcgccggtttgctcgtatcgctccgtacaacgacgcaccggtgct
agagaagacaacagcacagggaggcgacaaaggtggcattctgttctccaaagagcagaa
aacatggttaatgcaataaaggggttgttcatctcctgcgatgtaccgatggcacagttc
attgttaatctgaatgcttcaatgcccgcttcggacaagttcatcctgcacatgcttgac
ccgacacacatgtttgtgcagcctcatgtggcggagatgatcagaagtaagatttcagag
ttcagagaccaaaacagctacgagaagccaacatga
DBGET
integrated database retrieval system
