Oryza sativa japonica (Japanese rice) (RAPDB): Os07g0584500
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Entry
Os07g0584500 CDS
T02163
Name
(GenBank) RNA-binding region RNP-1 (RNA recognition motif) domain containing protein
KO
K14411
RNA-binding protein Musashi
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
Os07g0584500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dosa03019
]
Os07g0584500
Messenger RNA biogenesis [BR:
dosa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
Os07g0584500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Nup35_RRM_2
RRM_Nup35
Motif
Other DBs
NCBI-ProteinID:
BAF22034
RAP-DB:
Os07g0584500
UniProt:
Q0D539
LinkDB
All DBs
Position
7
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AA seq
472 aa
AA seq
DB search
MEADSGKLFVGGISWETDEDRLREYFSRFGEVTEAVIMRDRNTGRARGFGFVVFTDAGVA
ERVTMDKHMIDGRMVEAKKAVPRDDQSITSKNNGSSIGSPGPGRTRKIFVGGLASNVTEV
EFRRYFEQFGVITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALHKNFHELNGKMVEVKR
AVPKEQSPGPAARSPAGGQNYAMSRVHSFLNGFNQGYNPNPIGGYGMRVDGRYGLLTGAR
NGFSSFGPGYGMGMNSESGMNANFGANSSFVNNSNGRQIGSFYNGSSNRLGSPIGYVGLN
DDSGSLLSSMSRNVWGNENLNYPNNPTNMSSFAPSGTGGQMGITSDGINWGGPTPGHGMG
NISSLGLANLGRGAGDSFGLPSGSYGRSNATGTIGEPFSAPPNAYEVNNADTYGSSSIYG
DSTWRFTSSEIDMPPFGNDLGNVDPDIKSNIPASYMGNYTVNNNQTSRGITS
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atggaggcggactccgggaagctcttcgtcggcggcatctcgtgggagacggacgaggac
cgcctccgcgagtacttcagccggttcggggaggtcaccgaggccgtcatcatgcgggac
cgcaacaccggccgcgcccgtgggttcggcttcgtggtcttcaccgacgcaggcgtcgcc
gagcgggtcaccatggataagcacatgatcgacgggcgcatggtggaagcgaagaaagct
gttcccagggacgaccagagcatcaccagcaagaacaatggcagcagcatagggtcacct
ggaccaggccgtactagaaagatctttgttggaggcttggcctctaatgttactgaggtt
gaatttagaaggtattttgagcaatttggtgtgattacggatgtggttgtcatgtacgac
cacaacacgcagaggcctaggggctttggattcatcacctatgactcagaagatgcggtg
gacaaggcactgcacaagaacttccatgagctgaatggtaagatggttgaggtcaagaga
gctgttccaaaggagcaatcacctggacctgctgcacgttcacctgcgggagggcagaac
tatgctatgagcagggtccatagcttcttgaatggtttcaaccagggttataacccaaac
cctattggaggttatggcatgagggttgatggaaggtatggtctgcttacaggcgcacgg
aatggattctcttcatttggccctggttatggaatgggcatgaattctgaatctgggatg
aatgcgaattttggcgccaattctagttttgtcaataactccaatgggcggcagataggt
tcattctacaatggtagttcaaacagattaggtagtcctattggttatgttggtcttaat
gatgattcaggatcactattgagttcaatgtcaaggaatgtttggggtaatgaaaatctg
aactacccaaacaaccccacaaacatgagttcttttgcaccatctggaactggaggtcaa
atgggtattaccagtgacggtattaattggggagggcctactcctggccatggaatgggc
aacatttcaagccttgggctggctaaccttggccgtggagctggagacagttttggcttg
ccttctggcagctatggaaggagcaatgcaactggtaccattggtgaacccttctctgca
ccacccaatgcatatgaagtgaacaatgcagatacatatggcagcagctccatttatgga
gactcaacttggaggttcacgtcatctgagattgatatgcctccttttggtaatgacctt
ggaaatgttgatccagatatcaaatcaaacataccagcaagttacatgggcaactatact
gttaataataatcagacaagcagaggtatcacttcctag
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